Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1703 |
Symbol | |
ID | 4078279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1798978 |
End bp | 1799601 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638007017 |
Product | GCN5-related N-acetyltransferase |
Protein accession | YP_613698 |
Protein GI | 99081544 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.29935 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGAACT CAAACCAGAT GGGCCAAAAA GTCTCGATTG AGGCCAGTAT TCGCCCGGAG CATCGCGCCC AGGCAGCGCG TGGCTATTGG CAGGCCTTTG CACGCAAACT GCGCTACCCG CTGGGGCCCG CTTCCAAGGC GATGGCCTTT TTTGAACGCG TGATCGACCC GGAGCACGCC CTCAGCGCGG TTTCAGACAC CGGCGATTTT CTCGGTGCGG CCGGGTTCAA GACGTCGACT GGCAGTTTTA TCGGCGGGCA TTTCAACGAT CTGAGCCGCG TCTATGGCTC CATCGGCGCA ACCTGGCGCG GACTGTTGAT CCACACGCTC GAACGCGACT GCGAAGAGGG CACACTGCTG ATGGACGGGA TTTTTGTTGA ACCAGAGGCC CGCGGACTCG GGGTCGGCAC CAAATTGCTG CACGCGCTAA TGAACCGTGC CGAAAGCGCC GGATTGCAGC GCCTGCGCCT TGATGTCATC GACACCAATC CGCGCGCCCG AGCGCTCTAT GAGCGCGAAG GCTTCGTCCC CGGCCATGAG AAAAAGCTTG GTATTCTGGC GCCGCTTTTT GGGTTCTCAA CGGCGACAGA AATGGTCAAA ACGCTCCGGC CAGTACAGCT CTAG
|
Protein sequence | MANSNQMGQK VSIEASIRPE HRAQAARGYW QAFARKLRYP LGPASKAMAF FERVIDPEHA LSAVSDTGDF LGAAGFKTST GSFIGGHFND LSRVYGSIGA TWRGLLIHTL ERDCEEGTLL MDGIFVEPEA RGLGVGTKLL HALMNRAESA GLQRLRLDVI DTNPRARALY EREGFVPGHE KKLGILAPLF GFSTATEMVK TLRPVQL
|
| |