| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1629 |
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| Symbol | |
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| ID | 4077731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1736144 |
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| End bp | 1738018 |
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| Gene Length | 1875 bp |
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| Protein Length | 624 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006942 |
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| Product | hypothetical protein |
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| Protein accession | YP_613624 |
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| Protein GI | 99081470 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.128048 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAGG ATAGCGATGC GCTGCAAGCG GATTTCGAAA ATGAAGAAGT GATCGCTCCG
ATGGATGATG GTCCGCCACC TCAGAAACCG AGAGGACCAA TTGGAAAATC GGGCGCTGGA
GCGGGTAGGG CGGGGCGTGG TGGTAAGCAG GGCAGCGGCA AGCCGTCATC GATCTTGCCA
GAAGGATTCC CCGTGCAGCC GCTCGGTATG TCTGCGGGAA AGTACTATTT CCTCAATGCC
CGCGGTGAGA GAATCGATTT GACCGCAGGC GCTTTGAGTC AGCGTGCCAA TCTGGTGTCA
TTGCTGGCTG GCAGCACAAC GCCGAAACGG CACCTGAAAG ATATCGCTCC GCCGGACGCG
CGCAAGGATA CAGATTTCAA CCCTGCAAAT GCGGCTGACA AGCTCATGCA GGCCTGTGCC
GAAATGCCGC TTTATGATCC ATCGAAACCG GTCCGCCATT TCGGGACTTG GCGTGGCGGA
TCTGTGCATC CGGTTGTCCA CCTCGGCGAA ACGGTCGAGA CCTCATCGGA AGAAGAGGTT
GTCGGGCGCA TGATCGGTAG TGACCTCTAT CCCGCAGTGC CGACGCTGGG CCTCCCGGAT
GGGGTCGCGG CCACTGCAGA AGAGATGAAC ATCATCCGGA TGGCGCTTCG CGATGGGTGG
AACTGGGTGT CTCCAGATGC CGTGGATCTG GTGATAGGTT GGATTGGTCA GGCGGCACTA
GGCCAGTACC CCCGATGGCG CAGCCATATG TGGATCCGTG GGCGTTCTGG TGCCGGTAAA
ACAACGTTGC TCGAGGTGAT ATCTTCGCTG CTAGGTGGGA TGTCGACAGG TGTGAAGAGC
AGCGGGTCAT CGGCCTCGAT CAGGCAGACA ACCAACCGGA TGGCGATTGC GCGGATCTTT
GATGAGGCCG AGGGCACCGG GACCGGCGAC ATCGAAGATG TAATCGCTCT GTTTCGTCTG
ATGTCCGATG CGCATGGCGC GCGGGTGGAG CGAGGGACCT CTGACCATAC TGGCATTCGC
TTTGAGATCT ACGGAGCGGG CCTTCTGGGC TCGATCATTC CAGGATCGAT GACGCCACAG
GACAGATCCC GGTTTGTCGT TGTTCCTCTG AAGGTTAGAG AGAAGTCTTC AGATCCGGCG
CATGACGCGG TCGAGCTCGA CAAGTTGGAA CGAAGGGCAA AGGAGCTTGG CCCCCGGGTT
TGGAGGCGCA TGCTAAGCCT AGCGTCCCAG CGTTGGGATA GCACGTTTCG GGTTTACAAC
AGCCTTGTGC AGAGCCTCGG CGCCCAGGCA CGTGCAGGAG ACACGGTAGG CGCATTGCTT
GCCGGCTGGG ACCTGATGCT GTTCGAGAGG CCGCTGGTGG ACCCTGAGAC AAATCAGGCC
GATCCTAAGC GCATGGAGCG CGCTCTGGCC ATGGCACTCC CGCTTGTCGA GGAAACCCGC
GAGGCTGAGG AGGAGGGCGA AGGTGAGCGC CTGCTGACGT GGATCTTCGG AGCGATGATC
CACAAGGATC ACGGTGGCAT GATTTCGGTT AGCGAGTTGA TCCAGACCAT CCAGGAGTTC
CAGGACGTGA AGTCGGGCGA ATACCAGAAC AAGCTCCTCG CTCGATTGGG GCTGAGGGTC
ATGCCGGGCG AGCGCGGGCA GCGCGACCTC TTCGTGGCAA ACGGTGAGAA CCCGCAGCTG
AACAAGGCGC TCGCGAACAC GCGGTGGCGT GGCGGTGGGC ACCGCGCAGC GCTGGATACT
ATGCCTGAGG TGGCTCCTGC GCCAAAGCCA GTCAGAGTTG ATGGTAGGCC CAAGAGGGGC
CTCGTTGTGC CCGCGCGTTT CCTCCCCGGC TATATCAAAG AAACCGCCTC GAACGAGGGG
GAGGATGGCA TCTGA
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| Protein sequence | MTQDSDALQA DFENEEVIAP MDDGPPPQKP RGPIGKSGAG AGRAGRGGKQ GSGKPSSILP
EGFPVQPLGM SAGKYYFLNA RGERIDLTAG ALSQRANLVS LLAGSTTPKR HLKDIAPPDA
RKDTDFNPAN AADKLMQACA EMPLYDPSKP VRHFGTWRGG SVHPVVHLGE TVETSSEEEV
VGRMIGSDLY PAVPTLGLPD GVAATAEEMN IIRMALRDGW NWVSPDAVDL VIGWIGQAAL
GQYPRWRSHM WIRGRSGAGK TTLLEVISSL LGGMSTGVKS SGSSASIRQT TNRMAIARIF
DEAEGTGTGD IEDVIALFRL MSDAHGARVE RGTSDHTGIR FEIYGAGLLG SIIPGSMTPQ
DRSRFVVVPL KVREKSSDPA HDAVELDKLE RRAKELGPRV WRRMLSLASQ RWDSTFRVYN
SLVQSLGAQA RAGDTVGALL AGWDLMLFER PLVDPETNQA DPKRMERALA MALPLVEETR
EAEEEGEGER LLTWIFGAMI HKDHGGMISV SELIQTIQEF QDVKSGEYQN KLLARLGLRV
MPGERGQRDL FVANGENPQL NKALANTRWR GGGHRAALDT MPEVAPAPKP VRVDGRPKRG
LVVPARFLPG YIKETASNEG EDGI
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