| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1590 |
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| Symbol | |
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| ID | 4078399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1701431 |
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| End bp | 1701970 |
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| Gene Length | 540 bp |
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| Protein Length | 179 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006903 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_613585 |
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| Protein GI | 99081431 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.601825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGGAC GTATCTCGGC AGCCTGGGCA CGCTGTGAGC TGGCGCTGGC CGCATGTCTT
GCGGTCTCCA TCACGGCGCT GATCCTGCTC AATGTGGTGA CGCGAAGCCT TGGCGCGGCC
TTGTTCTGGG TGGATGAACT GGCGATTTAT GCGATGGCCT GGATGGCCTT TCTGGGCGCC
TCCGCAGCCG TGCATTTTGG CCATTCGGTC GCTGTGACGA TCCTCACCGA TACTTTGCCT
CTTGCGCTTC AGAAGATCGC GGCACAGCTG GTGGACGGGA TCGTTTTGGG GTTTGCGCTT
GCGATGCTGT GGTTTTGCTG GCGCTGGTTT GCGCCGCTGG CCCTGATCCA GAGCGGCTTT
GATCTGGCAG CTTTTCAGGG CGCGACGTTC AACTTTGTCT ACGCCGAACC CACCACCACC
CTCGGCCTTC AGAAACATTG GGTCTGGTCC GTGATGTGGG TCTTCGCGCT CGGGATGACA
CTGCACAGTT TTGCAAATCT GATCGGGCAG GGTGCCAACC CAGAGGATGA CCGTTCATGA
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| Protein sequence | MIGRISAAWA RCELALAACL AVSITALILL NVVTRSLGAA LFWVDELAIY AMAWMAFLGA
SAAVHFGHSV AVTILTDTLP LALQKIAAQL VDGIVLGFAL AMLWFCWRWF APLALIQSGF
DLAAFQGATF NFVYAEPTTT LGLQKHWVWS VMWVFALGMT LHSFANLIGQ GANPEDDRS
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