| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1573 |
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| Symbol | |
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| ID | 4078382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1680851 |
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| End bp | 1683130 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006886 |
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| Product | malic enzyme |
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| Protein accession | YP_613568 |
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| Protein GI | 99081414 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0280] Phosphotransacetylase
[COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGACA AGACCTCGGA ATCCCTGCGC GACGCGGCTC TGCGCTACCA CGAGTTCCCG
CGTCCCGGTA AACTGGAAAT TCGCGCCACA AAACCGCTGG CCACTGGCAA CGACCTTGCA
CGGGCCTACT CACCCGGCGT GGCTGAAGCC TGTCTTGAGA TCAAGGACGA CGAGGCCAAT
GCCGCGCGCT ACACGGCGCG GGGCAATCTG GTTGCGGTGG TCTCCAACGG CTCTGCGGTT
CTGGGACTTG GCAACATCGG TGCGCTGGCC TCCAAACCGG TGATGGAAGG CAAGGCGGTT
CTATTCAAGA ACTTCGCCAA TATCGACTGC TTTGACATTG AATTGAACGA GAGCGATCCT
GAGAAACTGG CCGACATCGT CTGCGCGCTG GAGCCGACCT TTGGCGCGGT AAACCTTGAA
GACATCAAGG CACCTGATTG TTTTATCGTC GAAAAACTCT GTCGCGAGCG GATGAACATC
CCCGTGTTTC ACGATGACCA GCATGGCACC GCGATCGTTG TCGGCGCCGC GGCCAAGAAC
GCGCTCCATG TAGCGGGCAA GAAGTTCGAG GACATCAAGA TCGTCTCGAC CGGCGGCGGG
GCAGCGGGCA TTGCCTGCCT CAACATGCTG CTGAAACTTG GGGTCAAGCG AGAGAACGTC
TGGCTCTGCG ATATTCACGG CTTGGTCTAT GAAGGCCGCG AGGAGGACAT GAACCCGCAC
AAGGCGGCCT TTGCTCAGGC TTCTGAGAAA CGGACGCTGG ATGAGGTGAT CGACGGCGCG
GATCTGTTCC TTGGCCTTTC CGGTCCCAAT GTGCTCAAGC CCGAGATGGT CACGAAGATG
GCGAAACGCC CGATCATCTT TGCGCTGGCG AACCCGACCC CGGAGATCAT GCCCGATGAG
GCGCGCAAGG TGGCGCCAGA CGCTATCATC GCCACGGGTC GCAGCGATTT TCCCAATCAG
GTCAACAACG TACTGTGCTT TCCGTTTATC TTCCGTGGCG CGCTGGACGT TGGCGCCACT
GAGATCAACG ACGAGATGCA GATTGCCTGT GTCGAGGGGA TCGCAGAGCT TGCGCGGACC
ACAACCTCAG CCGAGGCGGC TGCGGCCTAC AAGGGGGAGC AGCTCACCTT TGGCGCGGAT
TACCTGATCC CAAAGCCTTT TGACCCGCGT CTGGTGGCGG TGGTTTCCTC TGCCGTTGCG
CGCGCGGCCA TGTCCAGCGG CGTGGCCAAG CGGCCGATCG ACGATCTGGG GGCTTACCGC
GCCAAGCTGA ACCAAAGCGT GTTCAAATCC GCGCTCCTGA TGAAACCTGT GTTCGAGGCC
GCTCGCGCGG CAGCCCGCCG GATCGTCTTT GCTGAAGGCG AAGACGAGCG CGTCTTGCGC
ACCGCACAGG AGATGCTGCG CGAGACCACA GAGACTCCGA TCCTGATTGG TCGACCGGAG
GTGATCGAGC ACCGCTGCCA GCGTCTGGGA CTGTCGATCC GTCCCGGTCA GGACGTTCAA
ATTGTGAACC CTGAAAACGA TCCGCGCTAC CGTGACTATT GGACCAGCTA TCATCGGATC
ATGGAGCGCC GGGGGGTGAC GCCGGATCTC GCCAAAGCGA TCCTGCGCAC CAACACCACC
GCGATTGGCG CCATCATGGT GCATCGCGGA GAGGCGGACA GCCTGATCTG CGGCACGTTC
GGAGAGTACC GCTGGCACCT CAACTATGTG CAGCAGATCC TGGGCGGCGG TTCTTATGCG
CCACATGGGG CGCTCTCGAT GATGATCCTC GACGATGGGC CGATGTTCAT TGCCGACACC
CAGGTCCGCA TTGAACCGAC TCCAGAAGAA ATCGCCGAAA CCGTGATCGG TGCAGCGCGC
CATGTGCGCC GATTTGGTCT GAAGCCGCAG ATTGCGCTCT GTTCGCAGAG CCAGTTCGGC
AACATCCAAT GCGACACCGG GGAGCGTCTG CGCGCAGCTT TGGCGATCCT CGACGACAAG
CGGCGCGATT TTGTCTACGA GGGCGAAATG AACATCGACA CCGCGCTCGA CCCGGAGCTG
CGTGAGCGGA TCTTCCCCAA TTCGCGGCTA GAAGGTGCTG CCAATGTGCT GGTCTTTGCC
CATGCGGATG CGGCGTCTGG TGTGCGCAAC ATCCTCAAGA TGCGCTCTGG CGGGCTTGAG
GTCGGGCCGA TCCTGATGGG CATGGGCAAC CGCGCTCATA TTGTTTCCCC GTCGATCACC
GCACGCGGAT TGTTGAACAT GGCCGCCATC GCGGGCACTC CGGTCGCCCA TTACGGCTGA
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| Protein sequence | MPDKTSESLR DAALRYHEFP RPGKLEIRAT KPLATGNDLA RAYSPGVAEA CLEIKDDEAN
AARYTARGNL VAVVSNGSAV LGLGNIGALA SKPVMEGKAV LFKNFANIDC FDIELNESDP
EKLADIVCAL EPTFGAVNLE DIKAPDCFIV EKLCRERMNI PVFHDDQHGT AIVVGAAAKN
ALHVAGKKFE DIKIVSTGGG AAGIACLNML LKLGVKRENV WLCDIHGLVY EGREEDMNPH
KAAFAQASEK RTLDEVIDGA DLFLGLSGPN VLKPEMVTKM AKRPIIFALA NPTPEIMPDE
ARKVAPDAII ATGRSDFPNQ VNNVLCFPFI FRGALDVGAT EINDEMQIAC VEGIAELART
TTSAEAAAAY KGEQLTFGAD YLIPKPFDPR LVAVVSSAVA RAAMSSGVAK RPIDDLGAYR
AKLNQSVFKS ALLMKPVFEA ARAAARRIVF AEGEDERVLR TAQEMLRETT ETPILIGRPE
VIEHRCQRLG LSIRPGQDVQ IVNPENDPRY RDYWTSYHRI MERRGVTPDL AKAILRTNTT
AIGAIMVHRG EADSLICGTF GEYRWHLNYV QQILGGGSYA PHGALSMMIL DDGPMFIADT
QVRIEPTPEE IAETVIGAAR HVRRFGLKPQ IALCSQSQFG NIQCDTGERL RAALAILDDK
RRDFVYEGEM NIDTALDPEL RERIFPNSRL EGAANVLVFA HADAASGVRN ILKMRSGGLE
VGPILMGMGN RAHIVSPSIT ARGLLNMAAI AGTPVAHYG
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