Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1559 |
Symbol | |
ID | 4075857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1664004 |
End bp | 1665167 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638006872 |
Product | acyl-CoA dehydrogenase-like |
Protein accession | YP_613554 |
Protein GI | 99081400 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.456319 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGCAG AGCTGGATTT TCGCACATCA TCGGTGTGGA TGACCGACGA GCATAAGATG CTCGCCGATA TGACGCAGAG CTTTATCACC AACGAATGGG CGCCCAAATT CGAGCGCTGG CGCAAACAGG GCGAGATGGA TCGCTCGACA TGGGCGCAGG CCGGAGAACT GGGCCTGCTC TGCCCCTCCA TCCCCGAGGA ATACGGCGGT GCGGGCGGCG ATTTTGGCCA TGAGGCGGCG ATCCTGATTG AGGCCAGCCG CGCCAATCTC GCCAGCTGGG GCCACGGGAT CCACTCGGGC ATCGTGGCGC ATTACATCCT CTCCTACGGT ACCGAAGAGC AAAAACAGCG CTGGCTGCCC AAGATGGTGT CCGGCGAGTT GGTCGGCGCG CTGGCGATGA CAGAGCCGTG TACCGGATCT GACGTGCAGG CGATCAAAAC CAAGGCCATT CGTGATGGCA ATGTTTATCG GCTCTCGGGC CAGAAAACCT TTATTACCAA TGGGCAACAC GCCAACCTGA TCCTTGTTGC GGCCAAGACC GACCCGTCCC AGGGCGCAAA AGGCATCTCG CTTGTGGCGC TTGAAACCGA GGGCGCTGAA GGGTTCAGCC GGGGGCGTAA CCTCGAGAAG GTCGGCCTGC ACGCGGCGGA TACCTCGGAG CTCTTTTTCG ACAATATCGC TGTGCCACCG GAGAACATTC TGGGCGCAAC GGAGGCGCAA GGCTTTTACC AGATGATGCA GCAATTGCCG CAGGAACGGC TGATCATCGC CTGCGGCGCG GTTGGCGCGA TGCAGGGCGC GGTCGAGCGC ACCATCGCAT ATTGTAAAGA GCGCGAAGCC TTTGGCGGGC CGCTCACGCA GTTCCAGAAT ACCCGTTTCA AACTCGCCGA ATGCCTGACC AAGAGTAAAG TCGCCCGCGC CTTCCTTGAT GACTGCATGG TCCAGCACCT ACGTGGAGAG TTGACCGTCG AAAAGGCGGC GATGGCTAAA TACTGGATCA CCGACGCGCA AGGCGCTGTG CTTGATGAGT GCCTGCAATT GCACGGAGGA TATGGGTTCA TGCAAGAATA CGCCGTGGCA GAAATGTGGA CCGATGCCCG TGTGCAGCGC ATTTACGGCG GCACCAATGA GATTATGAAA GAGCTGATTG CGAGGTCTCT ATGA
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Protein sequence | MSAELDFRTS SVWMTDEHKM LADMTQSFIT NEWAPKFERW RKQGEMDRST WAQAGELGLL CPSIPEEYGG AGGDFGHEAA ILIEASRANL ASWGHGIHSG IVAHYILSYG TEEQKQRWLP KMVSGELVGA LAMTEPCTGS DVQAIKTKAI RDGNVYRLSG QKTFITNGQH ANLILVAAKT DPSQGAKGIS LVALETEGAE GFSRGRNLEK VGLHAADTSE LFFDNIAVPP ENILGATEAQ GFYQMMQQLP QERLIIACGA VGAMQGAVER TIAYCKEREA FGGPLTQFQN TRFKLAECLT KSKVARAFLD DCMVQHLRGE LTVEKAAMAK YWITDAQGAV LDECLQLHGG YGFMQEYAVA EMWTDARVQR IYGGTNEIMK ELIARSL
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