Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1545 |
Symbol | |
ID | 4075843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1652518 |
End bp | 1653561 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638006858 |
Product | tRNA 2-selenouridine synthase |
Protein accession | YP_613540 |
Protein GI | 99081386 |
COG category | [R] General function prediction only |
COG ID | [COG2603] Predicted ATPase |
TIGRFAM ID | [TIGR03167] tRNA 2-selenouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.256667 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0827797 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCAAA CTCTTTCCGA TTTTCTCGCG CATGGGCATG ACACGGTGAT CGATGTGCGC AGCCCGGCGG AATACGCCGA GGATCACGTG CCCGGCGCGA TCAATCTGCC AGTGCTAGAC AACGCCGAAC GCGCCGACGT GGGCACAATT TATGTGCAGC AGAGCCCGTT TCTGGCGCGC AAGATCGGGG CAGCGATGGT GTTTCGCAAC GCCGCTGACC ATATTGAACA TCGGCTGAGC CACCACGAAG GCAGTTGGAA ACCTCTGGTC TATTGCTGGC GCGGCGGTCA GCGCTCCGGT AGCTTTACCT GGATGCTGAG CCAGATTGGC TGGCGGGCCG AAGTGGTCAA GGGCGGTTAT CAGAGCTATC GCCGGCTTGT GCATCAGGCG ATGTATGAGG CGCCGCTTGC GCATCGTTTG ATGCTGCTCG ACGGGCTCAC TGGAACCGCC AAGACCGAGA TCTTGAAACA GGTCGCCGAG ATGGGCGGCC AGGTGTTGGA TCTCGAAGGC TTTGCGGGGC ATCGTGGCTC GCTCTTGGGC GAGATGCCGG GCGGGCAGCC AAGTCAGAAA CGCTTTGAAA GCTACATCGC CTGTGCTCTT GCCCAGATGG ATCCGGCACG TCCGGTGCTC GTTGAGGCAG AAGCCAGCAA GATCGGCGCA CGGATCCTGC CTCCGAGCCT CTGGGATGCC ATGAAGGCGG CGCCACGGAT TGATCTTGAG GTGCCCTTCG CGGCGCGTTG TGCCTATTTG CTGGAGGCTT ACGACGACAT CCTGTCGAAC GCAGAGACCC TGCGCGAAAA GCTCGGACTT CTGCGCGAGC ACCGCTCAGG CGCTGTAGTA GATGCCTGGT TCGAGCTCAT CGCGGCGGGG GATAAACCTG CGCTGGTGGC GCGGCTGATG GCGGATCACT ATGATCCGGC CTATCGCAAG GCGCGCAGCC GATATGAGGT GAGCGACCAG CGCAAGGTTG CCTTGACGGG ACTTGACGAG GCCGCGCGCA AACAGGCAGC TCAGCGGATC TTGGAGCTGC TCGACGCATC CTGA
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Protein sequence | MFQTLSDFLA HGHDTVIDVR SPAEYAEDHV PGAINLPVLD NAERADVGTI YVQQSPFLAR KIGAAMVFRN AADHIEHRLS HHEGSWKPLV YCWRGGQRSG SFTWMLSQIG WRAEVVKGGY QSYRRLVHQA MYEAPLAHRL MLLDGLTGTA KTEILKQVAE MGGQVLDLEG FAGHRGSLLG EMPGGQPSQK RFESYIACAL AQMDPARPVL VEAEASKIGA RILPPSLWDA MKAAPRIDLE VPFAARCAYL LEAYDDILSN AETLREKLGL LREHRSGAVV DAWFELIAAG DKPALVARLM ADHYDPAYRK ARSRYEVSDQ RKVALTGLDE AARKQAAQRI LELLDAS
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