| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1533 |
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| Symbol | |
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| ID | 4075831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1637844 |
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| End bp | 1639151 |
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| Gene Length | 1308 bp |
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| Protein Length | 435 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638006846 |
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| Product | hypothetical protein |
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| Protein accession | YP_613528 |
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| Protein GI | 99081374 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4645] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.208932 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGACG TCGCGCCTTT TCCGGCGCCC GATCAAAGCA GCGCTCAACG CGCCGCCCCC
ACATCCACCG GCGCCGATGG TGCAGGCCCC CTCGCGGGGG CCACGGCGCA GCTGCGCCCG
GATGTGCAGG GGCGCCCGCG CGACCCGCGA CTTGATTTTT ATCGCGGCAT CGCGATGTTC
ATCATCCTCT GCGCGCATAT CCCGGGCAAT CGCTGGACAG GCTGGATTCC GGCCCGCTTT
GGCTTTTCCG ACGCAACCGA GATCTTTGTG TTCTGCTCCG GCATGGCTTC CGCGATTGCC
TTTGGCGGCT CTTTCCAGCG CCACGGCTGG TGGTTGGGCA CCGCGCGCGT CGCCTACCGC
TGCTGGCAGG TGTTCTGGGC GCATATTGGC CTCTTTTTCT TTGTGGCCAT GTCGATGGCC
GCGCTCGATC TCTATGGCGG GTTTGAGAAA AGCTACATCG GCTCATTGAA CCTGAGACCG
TTTTTCAACG ATCCCGCAGA GCAGATCGTG GGGATTTTCA CCCTCACCTA TGTGCCGAAC
TACTTTGACA TTCTGCCGAT GTATCTGGTG GTGCTGGCCT TGATGCCTGC GATTATGAGC
GCGCAGAAAC TCGGCCTCTG GGCTGTGGCG GGGCTGTCGC TGGCGCTCTG GCTTCTGGCC
AACCCTTATG TTGTCGGACT TGGTCCCGAA GGCCTGTCGC TGCCCGCAGA GCCTTGGTCG
GACCGCGAGT GGTTCTTCAA CCCTTTCGGC TGGCAGCTTT TGTTCTTTAC CGGTTTTGCC
TTTATGGCAG GCTGGCTTCC CAAACCGCCG GTCAGCCGCG GACTGGCACT GTTAGCGGCC
GCCTTCTTGA TCCTGTCGAT GCCTTTTGGC TCGTGGAAGG TCTTCAGCTG GCTCAACAGT
GCGGCCCCCG ACCTGGGCGC AACGATCCGC CCTGCATGGG GCATCACCGG AGAGTGGCGC
GAGAAAACCG ACTTTGGCCT TCTGCGCTAT CTGCATTTCT TGTCGCTGGC TTACCTGGCA
TGGCTTGTGG CCGGTGAGAA CGGGCAAAAC CTCGTGGCCC GTGGCAGCTC TTTGGCCGCG
CGCTTCTGGG CTCAGATCCT GACGCTCATC ACCAAGGTCG GCCAGCAAAG CCTTGCTGTC
TTTGTCTTTT CCATGGCGCT TGCCCGTTTC ATTGGCGCGG CTCTGGATCA AACCGAGCGC
GGCATCCTTG TGACCGCGTT GGCCAATATC ACTGGCTTCA CTCTCATTAT CGGCTGCGCT
TTTGCAGCCG GCTGGTTCAA ATCCCAACCC TGGAGACGCA AACGATGA
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| Protein sequence | MADVAPFPAP DQSSAQRAAP TSTGADGAGP LAGATAQLRP DVQGRPRDPR LDFYRGIAMF
IILCAHIPGN RWTGWIPARF GFSDATEIFV FCSGMASAIA FGGSFQRHGW WLGTARVAYR
CWQVFWAHIG LFFFVAMSMA ALDLYGGFEK SYIGSLNLRP FFNDPAEQIV GIFTLTYVPN
YFDILPMYLV VLALMPAIMS AQKLGLWAVA GLSLALWLLA NPYVVGLGPE GLSLPAEPWS
DREWFFNPFG WQLLFFTGFA FMAGWLPKPP VSRGLALLAA AFLILSMPFG SWKVFSWLNS
AAPDLGATIR PAWGITGEWR EKTDFGLLRY LHFLSLAYLA WLVAGENGQN LVARGSSLAA
RFWAQILTLI TKVGQQSLAV FVFSMALARF IGAALDQTER GILVTALANI TGFTLIIGCA
FAAGWFKSQP WRRKR
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