| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1470 |
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| Symbol | |
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| ID | 4077767 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1571618 |
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| End bp | 1572316 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006781 |
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| Product | 5-methyltetrahydrofolate--homocysteine S-methyltransferase |
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| Protein accession | YP_613465 |
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| Protein GI | 99081311 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5012] Predicted cobalamin binding protein |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGAAG AAGAAGACAT CATCCTCTCA GAACTCGATG ACGAGGAACT GGTCCAACAA
ATGTTTGACG ACCTCTATGA CGGTCTGAAG GAAGAAATCG AGGAAGGCGT CAACATCCTG
CTCGAACGCG GCTGGGCGCC CTACAAGATC CTGACCGAAG CACTGGTCGG CGGCATGACC
ATCGTGGGTG CAGACTTCCG CGACGGCATT CTCTTCGTTC CCGAAGTGCT TCTGGCGGCC
AACGCCATGA AGGGTGGCAT GACGATCCTG AAGCCGCTTC TGGCAGAAAC CGGCGCACCG
CGCATGGGCT CCATGGTGAT CGGCACCGTG AAAGGCGACA TTCACGACAT CGGCAAGAAC
CTCGTCTCGA TGATGATGGA AGGCGCCGGT TTTGAGGTGG TGGACATCGG CATCAACAAC
CCGGTCGAAA ACTACCTCGA GGCCCTCGAA GAGCACAAAC CCGACATCCT CGGCATGTCC
GCGCTCCTGA CCACCACCAT GCCCTACATG AAGGTCGTAA TCGACACGAT GGTCGAGCAA
GGCAAGCGTG ACGATTACAT CGTGCTGGTG GGCGGCGCGC CCCTCAACGA AGAATTCGGC
AAGGCCATCG GCGCCGACGC CTACTGCCGC GACGCGGCTG TCGCGGTTGA AACCGCCAAA
GAATTTGTGG CGCGCAAGCA CAACGCCATG AACGCCTGA
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| Protein sequence | MSEEEDIILS ELDDEELVQQ MFDDLYDGLK EEIEEGVNIL LERGWAPYKI LTEALVGGMT
IVGADFRDGI LFVPEVLLAA NAMKGGMTIL KPLLAETGAP RMGSMVIGTV KGDIHDIGKN
LVSMMMEGAG FEVVDIGINN PVENYLEALE EHKPDILGMS ALLTTTMPYM KVVIDTMVEQ
GKRDDYIVLV GGAPLNEEFG KAIGADAYCR DAAVAVETAK EFVARKHNAM NA
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