Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1443 |
Symbol | |
ID | 4078073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1541561 |
End bp | 1542556 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638006754 |
Product | zinc-binding alcohol dehydrogenase |
Protein accession | YP_613438 |
Protein GI | 99081284 |
COG category | [C] Energy production and conversion [R] General function prediction only |
COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
TIGRFAM ID | [TIGR02823] putative quinone oxidoreductase, YhdH/YhfP family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.109309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.103295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCAAAG CCCTTGTTAT GACGCAAGAC AGCGAGAGCG GCAAAGCCGC TGCTGAAATT CAGGATCTGA CCCTTGAGGA TCTGCCGGAA GGAGAGGTCA CGGTCGCCGT CTACTATTCC ACCGTGAACT ACAAGGATGG CCTGTGTCTC AGCCCCAAGG GCGGCGGATT GGTGCGCAAT TATCCGCATG TGCCGGGGAT CGATTTTGCC GGCACCGTCG AGAGCTCCTC TGATGAGCGC TACGCCCCGG GCGATAAGGT GGTCCTGACC GGCTGGCGCG TGGGCGAAGC CCATTGGGGC GGCTATGCAC AAAAGGCCCG TGTCAAGGCG GATTGGCTGG TGCCGCTGCC CGAAGGGATC ACGCCCCGTC AGGCGATGGC CGTGGGCACT GCAGGCTTTA CTGCGATGCT GGCGGTGATG GCGCTGGAGG ATCACGGGCT GAAACCCGGA ACGGGACCGG TTCTGGTCAC AGGCGCGGCC GGGGGCGTTG GCTCCGTGGC GACGGCGATC CTCGCCAACC TCGGTTACGA GGTGGCTGCC GTTACCGGGC GTCCCGAGAC AGCCGACTAC CTCCAGAGCC TCGGCGCAAC CCAGATCGTG CCCCGCGAGG ATCTGAACGA GACCGTAAAA CGCCCGCTCG AAAGCGAGAC CTGGGCAGGC TGTGTCGACG CGGTCGGGGG GGATATGCTG GCGCGCGTGC TCGGGCAGAT GAAATACGGT GCCTCGGTTG CGGCCGTGGG GCTTGCGGGC GGTGCGGCTC TGCCGGCCAC TGTGATTCCC TTCCTTCTGC GTGGTGTGAA CCTCCTCGGC ATCGATTCCG TGATGCAGCC CTTTGAGAAC CGCCAGCGCG CTTGGCAGCG AATTGCCAGC GATCTGCCGC TCGAAAAGCT CGACGCCATG ATCCAGCCCG CATCACTGAC CGACCTGCCA AAACTCGGCG CCGATATTCT GGCCGGGCAG GTGAAGGGGC GCGTCGTCGT CGACGTCAAC GCCTGA
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Protein sequence | MFKALVMTQD SESGKAAAEI QDLTLEDLPE GEVTVAVYYS TVNYKDGLCL SPKGGGLVRN YPHVPGIDFA GTVESSSDER YAPGDKVVLT GWRVGEAHWG GYAQKARVKA DWLVPLPEGI TPRQAMAVGT AGFTAMLAVM ALEDHGLKPG TGPVLVTGAA GGVGSVATAI LANLGYEVAA VTGRPETADY LQSLGATQIV PREDLNETVK RPLESETWAG CVDAVGGDML ARVLGQMKYG ASVAAVGLAG GAALPATVIP FLLRGVNLLG IDSVMQPFEN RQRAWQRIAS DLPLEKLDAM IQPASLTDLP KLGADILAGQ VKGRVVVDVN A
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