| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1424 |
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| Symbol | |
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| ID | 4078054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1520328 |
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| End bp | 1520903 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006734 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_613419 |
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| Protein GI | 99081265 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0284128 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0259883 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACGTA TTTCGACTGC TGCTCTCATC GTGACCTGCC TTGCTACACC TGTCGTGGCT
AGTGATCTGT TCAGCAACAG CTCCAAGCGT AAGGTGTTTG CTGCCCAGAC CAAGTTTCTG
GATACCCGCG GGGCGACCCA ATATCGCGGC TCGGAGCGGT TGAAACCCGA CAGTCTTCAA
GATGACGTGC TGCCGGTCTA TCGCGGCAGC TATCGCGGGG AGTATCTGGA GGTGGCGCGC
AGCGCTGCGC GTGCAAACGG TGTGCCAGAG GATCTCTTTT TGCGATTGGT GCAGCAGGAG
AGCAACTGGA ACCCCACCGC CGAGTCCCAC AAGGGCGCGC TTGGTTTGGC GCAGTTGATG
CCGCAGACCG CCCGTACTCT GGGCGTGGAT CCGTTGGTCC CGGCTGAAAA CCTGAGGGGC
GGCGCCAAGT ATCTGGCGCA GCAGTACCGC AAGTTCGGCT CTTGGCGACT TGCGCTGGCG
GCTTATAACG CTGGACCTGA GGCGGTCACA CGCCATGGCG GCGTGCCGCC CTACAAGGAA
ACCCAAAATT ACGTGCGCAA GATCCTCGGT AGCTAA
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| Protein sequence | MRRISTAALI VTCLATPVVA SDLFSNSSKR KVFAAQTKFL DTRGATQYRG SERLKPDSLQ
DDVLPVYRGS YRGEYLEVAR SAARANGVPE DLFLRLVQQE SNWNPTAESH KGALGLAQLM
PQTARTLGVD PLVPAENLRG GAKYLAQQYR KFGSWRLALA AYNAGPEAVT RHGGVPPYKE
TQNYVRKILG S
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