Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1368 |
Symbol | |
ID | 4075861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1461575 |
End bp | 1462117 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 638006678 |
Product | hypoxanthine phosphoribosyltransferase |
Protein accession | YP_613363 |
Protein GI | 99081209 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0634] Hypoxanthine-guanine phosphoribosyltransferase |
TIGRFAM ID | [TIGR01203] hypoxanthine phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.282504 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAGC GACCATATGT CATTGATGTA ATGATCTCGG CCAAGGCCAT CGCTGCACGA ATCGAAGAGC TATGCGGCGA CATCACGGCC GAGTTTGGCG ATACCGACAA GCTCGTGGTC GTGGGCCTGC TGCGCGGAAG TTTTGTCTTT ATCGCGGATC TGGTGCGTGA GCTGGATCTC CCGATCGAGG TCGACTTCCT TGAGGCGTCC TCTTATGGCG ACGGCATGGA AAGCAGCCGA GAAGTGCGCA TTCTCAAAGA CTTGCGTGGC GCTATTGAAG GGCGCGATGT GCTGGTGGTT GAGGATATCG TCGACACGGG CCATACCCTG AACCATGTGA TCTCGCTCCT GAAGAGCCGC AAGCCTGCGC GTCTCAAATC CATTGCGCTT CTGGACAAAC CCTCGCGTCG CGAAGTCGAC TTTCGCGCAG ATTGGATCGG CTTTGAGATC CCGGATGAAT TTGTCGTGGG CTACGGAATC GACTTTGCCC AACGCAACCG CAACCTGCCT CACATTGGCA AAGTGCGCTT CACCGAAGTG TGA
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Protein sequence | MSERPYVIDV MISAKAIAAR IEELCGDITA EFGDTDKLVV VGLLRGSFVF IADLVRELDL PIEVDFLEAS SYGDGMESSR EVRILKDLRG AIEGRDVLVV EDIVDTGHTL NHVISLLKSR KPARLKSIAL LDKPSRREVD FRADWIGFEI PDEFVVGYGI DFAQRNRNLP HIGKVRFTEV
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