Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1358 |
Symbol | trkA |
ID | 4076375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 1449969 |
End bp | 1451345 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638006668 |
Product | potassium transporter peripheral membrane component |
Protein accession | YP_613353 |
Protein GI | 99081199 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0569] K+ transport systems, NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTA TCATCTGTGG AGCCGGGCAG GTCGGTTGGC AGATCGCACG GCATTTGTCC GGCGAACACA ACGACGTGAC GGTTGTCGAC AACAATCCTG ACCTTGTGCG CCGCGCGACA GATACGCTTG ATGTTCAAGG CATTGCGGGC TTTGCCTCAT ATCCGGATGT TCTTGATCGG GCCGGGGCGC GGGACGCGGA TATGATCATC GCCGCCACGC ACTCGGACGA GGTGAACATG GTCACCTGCC AAGTGGCGCA TTCCGTGTTT GCCATCCAGC GCAAGATCGC GCGTCTGCGG GCCAAGAGCT ATCTGAACGC GATTTATTCC GATCTCTATC GCCGGGACCA TCTGCCGATC GATGTGGTGA TCAGCCCGGA GCGGGAAGTT GCGGCGGCGG CTATGCAGCG TCTGCGCGCG CCGGCAGCTT TTGACACCGA AGTATTCATG GACGGACGTG CGCAGCTGTT GGGCATCAAC GTGGAGGCAG ACTGCCCCGT TGTAAACACG CCGCTGCGCC AGTTGACGGA GCTCTTCTCG ACGTTGCGTG CCATTGTGGT TGGCATTCGC CGCGACGGAT CGCTGTTTGC GCCGGAGCCA GGGGATCAAC TGTTTGTGGG CGATGCGGCC TATGTGTTTT GCCATGCAGA CGACGTGAGC CGCACGATGG AAGTCTTTGG AAAGACTGAG AAACGTCAGG AGCGCGTGGT GATCGTCGGC GGCGGCAATG TCGGCCTTGA AGTTGCCAAA GCGCTCGAGG CGCGCACCCG GCGCACGCGG GCCAAGATGA TCGAAAAGAA CCGCAAAAAC GCCGAGGTTG CCGCAGAGGC TCTGGAACGC ACGATCGTTC TGAATGGCGA TGGTCTGGAT CGGGGGCTGA TGATCGAGGC GGGCATCGAC AAGGCCGATG CCATGCTGGC GGTGACCGAT GACGACAAGA CCAACATGCT GGCAGCGGTG CGTGCCAAGA CCGAAGGCTG CCCGTTTGCA ATCGCCCTGA TCAACGACCC GACGCTGCTG CCGCTGCTGC CGCACCTCGG GATTGACGCG CATATCAATC CGCGCGCCAC CACCGTCAGT TCTATCCTGC GTCACATCCG CTATGGCCGT ATCCGGCAGG TTTATTCCAT TGGCGACGCC GAAGCGGAAG TTATTGAAAC CGAAGTGCTT TCTACCTCTC CCATGGCGGG GCAGGCCATT CGGGACATTG ATTTCCCCGA AGGTGTGCTG GTGGGCGCTG TATCCAAGAA CGGCGAGGTC ATGCGCCCCA GTGGCGGGCT TCGGATCGAG GCGGGGGACA CGATTGCCCT CTTTGCGATG GCCGCTGATG TGCGGGAGGT CGAGCGCCTG ATGCAAGTCT CGATCGACTA CTTCTAG
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Protein sequence | MKVIICGAGQ VGWQIARHLS GEHNDVTVVD NNPDLVRRAT DTLDVQGIAG FASYPDVLDR AGARDADMII AATHSDEVNM VTCQVAHSVF AIQRKIARLR AKSYLNAIYS DLYRRDHLPI DVVISPEREV AAAAMQRLRA PAAFDTEVFM DGRAQLLGIN VEADCPVVNT PLRQLTELFS TLRAIVVGIR RDGSLFAPEP GDQLFVGDAA YVFCHADDVS RTMEVFGKTE KRQERVVIVG GGNVGLEVAK ALEARTRRTR AKMIEKNRKN AEVAAEALER TIVLNGDGLD RGLMIEAGID KADAMLAVTD DDKTNMLAAV RAKTEGCPFA IALINDPTLL PLLPHLGIDA HINPRATTVS SILRHIRYGR IRQVYSIGDA EAEVIETEVL STSPMAGQAI RDIDFPEGVL VGAVSKNGEV MRPSGGLRIE AGDTIALFAM AADVREVERL MQVSIDYF
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