| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1271 |
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| Symbol | |
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| ID | 4077431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1369443 |
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| End bp | 1370549 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006579 |
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| Product | glucose sorbosone dehydrogenase |
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| Protein accession | YP_613266 |
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| Protein GI | 99081112 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACGCC CGCTCGCCGT GATCGCCAGT TTGATGTTTA GTGCCGCGAT GGCCGTGCCC
TCGCTGGCGC AGCAAATGGA CTCAAGCCAA GGCACGCTCC GCGTTGAAAA AATGGCCGAT
GGGTTTGATG TTCCTTGGGG TTTTACGTTT TTGCCCGGAC GCGCACTGCT GGTCACGGAG
CGCTCCGGAC AGCTTTGGTA TCTGAACGGC GCGCGACGCC AACAGGTCGA TGGCGTCCCT
GAGATCGCTG CGGACGGGCA GGGTGGCCTT CTGGACGTTG TTGCCGCGCG GGATTTCGTT
CAGAGCCGCA CCGTATATCT CACGTTTGCC CGTCCGCAGG GGCGCGGCGC GGGGACCGCT
GTGGCACGGG CTGAACTCTC TGAAGACGGC AGCCGATTCG ACTCGCTTGA GGTGATTTTT
GAAGCCACGC CAGGCGCGCG GGGCGGGCGG CACTTTGGCT CGCGGCTGGT CGAAGCCCCC
GACGGCAGTC TTTATGTCAG CCTCGGAGAA CGTGGTGACC GTCCCAGCGC ACAGGATCTG
TCACGCGAGC AGGGTTCGAT TATTCGCATC CTTCCGGATG GCAGCATTCC CTCGGACAAT
CCTTTTGTAA ATTCTGAGGA CGCGCGTCCG GCGATCTGGT CCTACGGCCA CCGCAACCCG
CAGGGCATGG CGCTTGATGC GGCCGGCGAC ATCTGGGCCG TTGAACATGG CGCGCGCGGC
GGCGATGAGA TCAACCGGAT CACACGGGGC GCCAACTATG GTTGGCCGGT CATTTCCTAC
GGGCGCCACT ATTCGGGGCT GAAGATCGGC GAGGGCACCG AAAAGCCGGG GCTGCAACAG
CCGGAGTGGT ATTGGGATCC CTCCATCGCG CCCTCGGGTA TGATGATCTA CTCGGGCAAG
CTCTGGCCCA ACTGGCGCGG AGACATCTTT GTGGGATCCC TGAAATTTGA TTACATCTCA
AGGCTCTCGG GGGCACCCCT GCAGGAGGTC GAGCAGATGA AATCGCCCGA AACCGCAAGG
GTGCGCGATA TCCGCGAAGC CCCCGATGGC AGCATCTGGT TTGCCTCGGA ATACGAGGGC
GCCCTCTTTC GGATCACCCC GAACTGA
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| Protein sequence | MLRPLAVIAS LMFSAAMAVP SLAQQMDSSQ GTLRVEKMAD GFDVPWGFTF LPGRALLVTE
RSGQLWYLNG ARRQQVDGVP EIAADGQGGL LDVVAARDFV QSRTVYLTFA RPQGRGAGTA
VARAELSEDG SRFDSLEVIF EATPGARGGR HFGSRLVEAP DGSLYVSLGE RGDRPSAQDL
SREQGSIIRI LPDGSIPSDN PFVNSEDARP AIWSYGHRNP QGMALDAAGD IWAVEHGARG
GDEINRITRG ANYGWPVISY GRHYSGLKIG EGTEKPGLQQ PEWYWDPSIA PSGMMIYSGK
LWPNWRGDIF VGSLKFDYIS RLSGAPLQEV EQMKSPETAR VRDIREAPDG SIWFASEYEG
ALFRITPN
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