| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1257 |
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| Symbol | |
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| ID | 4077651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1354554 |
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| End bp | 1355243 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006565 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_613252 |
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| Protein GI | 99081098 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | [TIGR02154] phosphate regulon transcriptional regulatory protein PhoB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.536699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGTCG ATCAGCCTAC TGTTCTGGTC GTCGAGGACG AACTGGCGCA GCGCGAAGTG
CTTGCTTACA ATCTGGAGGC GGACGGCTTT CGGGTGATCA AGGCGGAGAA CGGTGAAGAG
GCGCTGCTGC TCGTCGAAGA GGACATGCCT GACATCATCG TACTCGACTG GATGATGCCC
AATCTGACCG GAATCGAGAT CTGCCGCCGC CTGAAGACGC GCACGGACAC CCGGAGCATT
CCGATCATCA TGCTCTCCGC GCGCTCGGAA GAGGTCGACA AGGTGCGCGG TCTGGAGACC
GGCGCGGACG ACTATGTGGT GAAACCTTAC TCCGTGATCG AGCTGATGGC CCGGGTGCGC
ACGCAACTGC GCCGCGTCCG GCCAGCCACC GTTGGCATGC GGCTCGAGTT TGACGACATT
ATCCTTGACG CGGAAACGCA CAAGGTGAGC CGCTCGGAAC ATCCGCTCAA GCTTGGCCCG
ACCGAGTTTC GCCTGCTCTC GACCTTTATG GAGAAGCCGG GCCGTGTCTG GAGCCGTGAA
CAGCTGCTGG ATCGCGTCTG GGGGCGGGAT ATCTATGTCG ACACCCGCAC CGTCGATGTT
CACATCGGCC GTCTGCGCAA GGCACTGACC CAGCATGGGG GCGATGATCC CGTCCGTACG
GTGCGCGGTG CGGGCTATGC GCTCGGGTAG
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| Protein sequence | MAVDQPTVLV VEDELAQREV LAYNLEADGF RVIKAENGEE ALLLVEEDMP DIIVLDWMMP
NLTGIEICRR LKTRTDTRSI PIIMLSARSE EVDKVRGLET GADDYVVKPY SVIELMARVR
TQLRRVRPAT VGMRLEFDDI ILDAETHKVS RSEHPLKLGP TEFRLLSTFM EKPGRVWSRE
QLLDRVWGRD IYVDTRTVDV HIGRLRKALT QHGGDDPVRT VRGAGYALG
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