| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1162 |
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| Symbol | |
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| ID | 4075948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1251838 |
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| End bp | 1252422 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638006467 |
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| Product | HNH endonuclease |
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| Protein accession | YP_613157 |
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| Protein GI | 99081003 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1403] Restriction endonuclease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00934225 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGACGGAG ACTTCAGGAC AGAATTCGTA AGAGAGCCGC GGGCTCTGAA GCAGCACCCG
GCTTTGGTGC TCAATGCGGA TTATCGTCCT TTGTCATACT ATCCCTTGTC ACTCTGGCCA
TGGCAGGACG CCGTCAAAGC CGCATGGCTC GACCGGGTTG CCATCGTGGC CGAGTATGAC
GAGGTTGTGC GCAGTCCCAG CACCGAAATC CGAATACCTT CGGTTGTGGT ACTGAAAGAT
TTTGTCAAAC CCCAAAAGCG CGTGGCCTTC ACGCGCTTTA ATTTATTCTT GCGCGACGAA
TTTCGCTGTC AGTACTGCGG CGCAAAGGGA GACCTTACCT TTGATCATGT GGTGCCGCGC
GCCTCTGGGG GGATCACCAG CTGGGAGAAC GTGGTCGCGG CCTGCTCGCG TTGCAACCTG
AAGAAAGGCT CCAAACCGCT GCACCGTGCG GGCATGTCCC TGCGCAAACC GCCGCGCCGT
CCGGGCGCGG AAGAGCTGCG CAATATGGGG CGGAAGTTTC CACCCGGATA CCTGCATGAA
AGCTGGATGG ACTACCTCTA TTGGGATAGT GAGCTTGAGG CTTGA
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| Protein sequence | MDGDFRTEFV REPRALKQHP ALVLNADYRP LSYYPLSLWP WQDAVKAAWL DRVAIVAEYD
EVVRSPSTEI RIPSVVVLKD FVKPQKRVAF TRFNLFLRDE FRCQYCGAKG DLTFDHVVPR
ASGGITSWEN VVAACSRCNL KKGSKPLHRA GMSLRKPPRR PGAEELRNMG RKFPPGYLHE
SWMDYLYWDS ELEA
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