| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1120 |
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| Symbol | |
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| ID | 4077241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1203290 |
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| End bp | 1206709 |
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| Gene Length | 3420 bp |
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| Protein Length | 1139 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006424 |
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| Product | indolepyruvate ferredoxin oxidoreductase |
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| Protein accession | YP_613115 |
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| Protein GI | 99080961 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4231] Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.429591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC AAAAGATTTC GCTCAATGAC CGTTACGATC TGGAAAAATC GCCCATTCTC
TTGAATGGGA CTCAGGCGCT GGTGCGTTTG ATGTTGATGC AGAAGGCGCG CGATGTGGCT
GCGGGTCTCA ATACGGCGGG GCTGGTGACC GGCTATCGCG GCTCGCCGCT TGGCGCGGTC
GACATGCAGA TGAAGCGGGC CGAAAAACTG CTGACGCAAT CTGATGTGAC GTTCCAATAT
GGGCTCAACG AGGATCTCGC CGTCACCGCG CTTTGGGGGG CGCAGCAGGC GGAAATCCGC
GGTGAGGGTA AATACGACGG TGTCTTTGGG CTCTGGTATG GCAAGGGGCC GGGGGTGGAC
CGCTCTGGCG ACGCGCTGCG GCACGCCAAT ATGGCGGGCT CCTCAAAGCA CGGTGGCGTC
CTGGTGGCGA TGGGTGACGA CCACACCGGC GAAAGCTCCA CCGTGCTGCA CCAGTCCGAG
TGGTCGCTCT TGGATTGTTA CCTGCCGATC GTAAGTCCGG CAGGGGTTCA GGAAATTCTC
GACTACGGCA TCTATGGCTA TGCTTTGTCA CGGTTTTCCG GTCTCTGGGT TGGTCTCAAG
ACGATGAAGG ACACCATCGA GGTGACCTCT GTTGTCGACG GTGATCCCAA TCGCATTCAG
CTTGTCACAC CCGAAATGGA TCTGCCCGCG GATGGGCTGA ACATTCGCCT CGATGATGAC
CGCTTCCGCC AGGAAGACCG CATCATCGAC CACAAGCGTT TTGCCGCCGA AGCCTTCAGC
CACGCCAACA AGATGGACAA ACGGGTCTGG GGCAAGCCCG GGGCCAAGAT CGGTTTTGTG
GCCGCCGGCA AGAACTGGCT GGATCTGGTT CACGCGCTAA GCCTTTTGAA TATTGACGAA
AACATGGCCG AGCGCCTGGG TATCACCACC TATAAGGTGG GCCAGACCTG GCCGATGGAT
ATGAAGGGCT TTAATGCCTG GGCCGAAGGG CTCGACCTGA TTGTGGTCGT CGAGGAAAAG
CGCAAGCTGA TCGAGATCCA GATCAAGGAA GCGCTGTTTG ACAACCGGCG CGGTCGCCGC
GTCTATGGCT GGTACAAGGG CGGCGCGGGC ACCATGCACC GCGAGGAACT GTTCCCCACG
AAATATGCGC TCGACCCGAT CATGATTGCC GAGAAACTGG GCAATATCCT TATCGAGGAA
GGGCGCGACA CCGAAGCGAT CCGCGCCGGA CTTGCCGATC TTGACGAGGC GCGCCGCGCC
GACAACGCTG AGGAAATCGC CTCGCGCCTG CCGTATTTCT GTTCCGGCTG CCCGCATAAT
TCCTCGACCA AGCTGCCCGA TGGCGCACGC GCCTATGCGG GGATTGGCTG TCACTTCATG
GTGCAGTGGA TGGACCGGGA AACGGTCGGC TTTACCCATA TGGGCGGCGA GGGCGCCAAC
TGGATCGGCG AGGCTCCGTT TTCCAATAGA AATCATGTTT TTCAAAACCT CGGGGACGGA
ACTTACAATC ACTCCGGGGT GATGGCGATC CGTGCGGCGC TCGCTGAGGG CACCAATATC
ACCTATAAGA TCCTCTATAA TGACGCGGTG GCGATGACCG GTGGCCAGCA GGCCGAAGGC
GGTCTCACGG CGCATCAGAT CGCCCATGAA TTGCGCGCGA TGGGGGTCAA AACCATCGCC
GTGGTCTATG ACGAAAAAGA AGACGTGGAC GCCAAGCTCT TTCCCAGCGG CATGCGGATG
CATGAGCGCG CCGAGCTCAT GCAGGTGCAG CGCGAGTTTG AACAGATCGA GGGCGTCTCT
GCCATTATCT ACGTGCAGAC CTGCGCTGCG GAAAAACGCC GCCGCCGCAA GAAAGGCCTG
TTCCCGGATC CCGATCAGCG GATCTTTATC AATTCGGACG TCTGCGAAGG CTGTGGAGAT
TGCGGCGTGC AATCAAACTG CGTCTCCATC GTGCCAAAGG AGACCGAACT GGGGCGCAAA
CGGGCCATTG ACCAGTCGAG CTGCAACAAG GATTTTTCTT GCGTCAACGG GTTCTGCCCG
TCGTTCCTCA GCATTGAGGG CGCCAAGATC AAGAAGAGCG CAACGGCCAG CCTCGATTTG
CCGGACCTGC CCGAACCGCA GCTGCCGGAG ATCGACGGCA CGCATAACGT GGTGATCACC
GGCGTGGGCG GCACAGGCGT TGTGACCATC GGCGCGGTGC TGGCACAGGC CGCCCAGATC
GACGGCAAGG GCGCGGGCAT GATGGAGATG GCGGGGCTCG CCCAAAAAGG CGGTGCGGTA
CATATCCATT GCCGCCTCGC CAACCGTCCC GAAGACATCA GCGCCATCCG GGTCGCCACC
GGCGAGGCGC ATGCGCTGAT CGGCGGCGAT CTGGTGGTGA GCGCGGGCGC AAAGACGCTG
GGGCTGACCT CGACGGGCCG CACCGGTGCG GTGGTCAACA GCCATGAAAT CATCACGGGT
GACTTCACTC GAAACACCGA TTTTTCCTTG CCAAGCGACA GGTTGCAGGT CGCGCTTCAG
GCGCGGATTC GGGATCGGCT TGATCTCTTT GATGCGTCGG AACTGGCACG GGTCAGCATG
GGAGATTCGA TTTTCTCCAA CATGATGGTC TTTGGCGCCG CTTGGCAGCG GGGGCTGATC
CCGGTGCGGT TTGAGGCGAT CAAACAGGCG ATCGAGCTGA ATGGCGCAGC GGTCGAAAAA
AACCTGCGCG CCTTTGATAT TGGCCGTTGG GCGGTGCTCT ATCCCGACGA GGCAGCAAAG
CTGCTGACGC CCAATGTGGT GGAACTACCC AAGTCGCTTG ATGAGAAGAT CGCCTATCGC
CGCGATCATC TGATCGCCTA CCAAGGCAAG CGTCTGGCCA AGCGGTATGA CAAACTCCTG
AGCGGAATTT CTGACGCCCG CCTCAAGGAA GCCGTGGCAA AAGGCTATCA TAAGCTGTTG
AGCTACAAGG ATGAATACGA GGTGGCGCGG CTTCTTCTGA GCAGTCGCGA GAAGGCCGAA
GAGGCCTTTG AGGGGGATCT CAAGATCAGC TACAACCTCG CGCCGCCGCT TCTGGGGGGC
AAGGATGCCA ATGGCCGCCC GAAAAAGCGC AAGTTCGGCC CCCGCACTGA ACGTCTGTTC
CGCGTTCTGG CCAAGCTCAA ATCCCTGCGC GGCACGCCTC TGGATATCTT TGGCTATACT
GCGGAACGCA AGATGGAGCG CGCGCTCATC AAACAATACG AGGCCGACAT GAAGGCGTGG
CTGCCAAAGG CCGGGAGCGT CGACCCGGGC GCCTTGGTTG CGCTTGCGGA ACTGCCCTTG
CAGATTCGCG GCTTTGGCCC TGTGAAAATG AAAAACGAGC AAGCAGCCGC CAAACGGCGC
GAGGAATTGC TCGTGGCGCT GAAACAGGGG GCAACGCCGG TCAAAACGGC CGCAGAATAG
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| Protein sequence | MSTQKISLND RYDLEKSPIL LNGTQALVRL MLMQKARDVA AGLNTAGLVT GYRGSPLGAV
DMQMKRAEKL LTQSDVTFQY GLNEDLAVTA LWGAQQAEIR GEGKYDGVFG LWYGKGPGVD
RSGDALRHAN MAGSSKHGGV LVAMGDDHTG ESSTVLHQSE WSLLDCYLPI VSPAGVQEIL
DYGIYGYALS RFSGLWVGLK TMKDTIEVTS VVDGDPNRIQ LVTPEMDLPA DGLNIRLDDD
RFRQEDRIID HKRFAAEAFS HANKMDKRVW GKPGAKIGFV AAGKNWLDLV HALSLLNIDE
NMAERLGITT YKVGQTWPMD MKGFNAWAEG LDLIVVVEEK RKLIEIQIKE ALFDNRRGRR
VYGWYKGGAG TMHREELFPT KYALDPIMIA EKLGNILIEE GRDTEAIRAG LADLDEARRA
DNAEEIASRL PYFCSGCPHN SSTKLPDGAR AYAGIGCHFM VQWMDRETVG FTHMGGEGAN
WIGEAPFSNR NHVFQNLGDG TYNHSGVMAI RAALAEGTNI TYKILYNDAV AMTGGQQAEG
GLTAHQIAHE LRAMGVKTIA VVYDEKEDVD AKLFPSGMRM HERAELMQVQ REFEQIEGVS
AIIYVQTCAA EKRRRRKKGL FPDPDQRIFI NSDVCEGCGD CGVQSNCVSI VPKETELGRK
RAIDQSSCNK DFSCVNGFCP SFLSIEGAKI KKSATASLDL PDLPEPQLPE IDGTHNVVIT
GVGGTGVVTI GAVLAQAAQI DGKGAGMMEM AGLAQKGGAV HIHCRLANRP EDISAIRVAT
GEAHALIGGD LVVSAGAKTL GLTSTGRTGA VVNSHEIITG DFTRNTDFSL PSDRLQVALQ
ARIRDRLDLF DASELARVSM GDSIFSNMMV FGAAWQRGLI PVRFEAIKQA IELNGAAVEK
NLRAFDIGRW AVLYPDEAAK LLTPNVVELP KSLDEKIAYR RDHLIAYQGK RLAKRYDKLL
SGISDARLKE AVAKGYHKLL SYKDEYEVAR LLLSSREKAE EAFEGDLKIS YNLAPPLLGG
KDANGRPKKR KFGPRTERLF RVLAKLKSLR GTPLDIFGYT AERKMERALI KQYEADMKAW
LPKAGSVDPG ALVALAELPL QIRGFGPVKM KNEQAAAKRR EELLVALKQG ATPVKTAAE
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