| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1111 |
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| Symbol | |
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| ID | 4077818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1192007 |
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| End bp | 1193008 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638006415 |
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| Product | glyceraldehyde-3-phosphate dehydrogenase |
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| Protein accession | YP_613106 |
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| Protein GI | 99080952 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase |
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| TIGRFAM ID | [TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCA AAGTTGGAAT CAATGGCTTC GGACGTATCG GCCGCTGCAC CCTCGCCCAT
ATCGCGGGCA GCTTTCGCAA CGATATCGAG GTGATCAAGG TCAATGCGAC CGGCCCGATC
GAGACGGCAG CGCATCTCAT CAAATACGAC AGCGTGCATG GCCGTTTCCC CGGTCAGGTC
GATTTCAGCG AAGGCCGCCT GAACCTTGGC CGCGGCGACA TGCAGGTGTT TTCCACCTAC
GACATGGACA CGCTGGACTG GGAAGGCTGC GATGTCGTGC TGGAATGCAC CGGCAAATTC
AACGATGGCC TGAAGGCGAA GAAGCACCTC GAGCGCGGCG CAGGCAAGGT TCTGCTGTCC
GCACCTGGCA AGAACGTGGA CCGCACCGTG GTTTACGGCG TCAACGACGA GGATCTTCTG
TCCACCGACA AGATGGTCTC CAACGGGTCT TGCACCACCA ACTGCCTTGC ACCGCTGGCC
AAGGTACTGG ACGAGGCCTT TGGCATCGAG CATGGCATCA TGACCACCAT CCACGCCTAC
ACCGGCGATC AGCCGACGCT AGACCGCCGT CACGACGATC TCTACCGCGC CCGTGCGGCA
GCGATGTCGA TGATCCCGAC CTCTACGGGC GCGGCCAAGG CGCTGGGTGA GGTTCTGCCG
AACCTCAAGG GCCGTCTCGA TGGCTCAGCG ATCCGCGTGC CGACCCCGAA TGTGTCCGCG
GTGGACCTGA CCTTCCGCGC GGGGCGCGAG GTCACCGCCG AAGAGGTGAA CGCCGCCGTG
GCAGAGGCGT CCAAGGGCCA TATGTCGCGC GTTCTGGGCT ATGAGCCCGC GCCGCTGGTC
TCGACCGACT TCAACCACAC CGAAGAAAGC TCCATCTTTG CGCCCGACCA GACCCGCGTG
GTCGACGGTC GCATGGTGCG CGTGCTGGCG TGGTATGACA ACGAATGGGG CTTCTCGGTC
CGGATGGCCG ATGTTGCCAC CGCCATGGGT CGCCTGAACT AA
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| Protein sequence | MTIKVGINGF GRIGRCTLAH IAGSFRNDIE VIKVNATGPI ETAAHLIKYD SVHGRFPGQV
DFSEGRLNLG RGDMQVFSTY DMDTLDWEGC DVVLECTGKF NDGLKAKKHL ERGAGKVLLS
APGKNVDRTV VYGVNDEDLL STDKMVSNGS CTTNCLAPLA KVLDEAFGIE HGIMTTIHAY
TGDQPTLDRR HDDLYRARAA AMSMIPTSTG AAKALGEVLP NLKGRLDGSA IRVPTPNVSA
VDLTFRAGRE VTAEEVNAAV AEASKGHMSR VLGYEPAPLV STDFNHTEES SIFAPDQTRV
VDGRMVRVLA WYDNEWGFSV RMADVATAMG RLN
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