Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1054 |
Symbol | |
ID | 4078112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1133065 |
End bp | 1134333 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638006358 |
Product | 3-oxoacyl-(acyl carrier protein) synthase II |
Protein accession | YP_613049 |
Protein GI | 99080895 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0590595 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCGAG TAGTAGTTAC CGGTCTGGGC CTGGTGACCC CCCTGGCATC TGGGGTTGAG GAAACTTGGG CACGTCTTCT GGATGGCCAG TCCGGCGCGG GCCCCATCAC TCTGTTTGAT GCAGAGGCCA GCGGTGTTGC AACAACCTAT GCCTGTGAAG TGCCCCGTGG CGACGGCAGC AATGGCACCT TCAATCCTGA CGATTGGGTT GTGAAAAAAG ATCAAAAGAA GATCGACGAT TTCATCCTCT ACGGGATCGC CGCCGCTGAA ATGGCCGTGA AGGACGCAGG CTGGACCCCC GAAGCCGAAG AGGACCGTCT GCGCACCGGC GTGATGATCG GCTCCGGTAT CGGTGGTCTG AGCTCGATTG CAGATACAGC CGTCATGATT AAGGAAAAGG GCCCGCGTCG CGTGTCTCCG TTCTTTATTC CCGGCGCGCT GATCAACCTC ATCTCCGGTC AGGTCTCCAT CCGTCATGGC TTCAAAGGTC CAAACCACTC GGTTGTGACC GCGTGTTCCA CGGGCGCTCA TGCGATTGGC GATGCGTCGC GTCTCATTAA ATCCGGCGAT GCGGATGTGA TGATCGCGGG CGGGGCCGAG GCGGCAATCT GCGAGATCGG CATTGCGGGA TTTAACGCGT GCAAGGCGCT TTCGACGAAA TATGCCGAGG ATCCCACCAA AGCCTCGCGT CCCTATGATG CGGACCGTGA CGGCTTCGTG ATGGGCGAGG GCGCGGGCAT CGTGGTGCTC GAGGAATACG AACACGCCAA GGCGCGCGGC GCCAAGATCT ACGGCGAGGT TCTGGGCTAT GGTCTGTCGG GCGATGCCTA TCACATCACC GCCCCCTCCG AGGATGGCGA AGGCGGCGAA CGCTCCATGC GCGCTGCACT GGCCAATGCG GGGCTGAGCG CGGCAGATGT CGACTATATC AACGCGCATG GCACCTCCAC CATGGCCGAC ACCATCGAGC TTGGTGCCGT GGAGCGTCTG TTGGGCGATC ACGCCAAGAA TGCGACGATG TCCTCGACCA AATCCGCAAC CGGGCACCTT TTGGGCGCGG CGGGTGCGAT CGAGGCGATC TTCTCCATTC TGGCGATCCG CGATCAGGTG GCCCCGCCCA CCATCAACCT CGACACCCCT GCCGTGGAAA CGCCGGTTGA TCTGGCCCCC AATGCCAAGC GCGAACGCAA GATCGACGTG GCGCTGTCCA ACTCCTTCGG CTTTGGCGGC ACCAATGCTT CGGTGGTCTT CGGGAAAGTG AGCGACTGA
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Protein sequence | MRRVVVTGLG LVTPLASGVE ETWARLLDGQ SGAGPITLFD AEASGVATTY ACEVPRGDGS NGTFNPDDWV VKKDQKKIDD FILYGIAAAE MAVKDAGWTP EAEEDRLRTG VMIGSGIGGL SSIADTAVMI KEKGPRRVSP FFIPGALINL ISGQVSIRHG FKGPNHSVVT ACSTGAHAIG DASRLIKSGD ADVMIAGGAE AAICEIGIAG FNACKALSTK YAEDPTKASR PYDADRDGFV MGEGAGIVVL EEYEHAKARG AKIYGEVLGY GLSGDAYHIT APSEDGEGGE RSMRAALANA GLSAADVDYI NAHGTSTMAD TIELGAVERL LGDHAKNATM SSTKSATGHL LGAAGAIEAI FSILAIRDQV APPTINLDTP AVETPVDLAP NAKRERKIDV ALSNSFGFGG TNASVVFGKV SD
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