| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_1045 |
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| Symbol | rpsF |
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| ID | 4078103 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1124490 |
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| End bp | 1124843 |
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| Gene Length | 354 bp |
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| Protein Length | 117 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006349 |
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| Product | 30S ribosomal protein S6 |
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| Protein accession | YP_613040 |
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| Protein GI | 99080886 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0360] Ribosomal protein S6 |
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| TIGRFAM ID | [TIGR00166] ribosomal protein S6 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.146697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCACTCT ACGAGCATGT CATGATTGCG CGTCAGGACC TGTCCAACTC GCAAGCTGAA
GGCCTCATCG AACACTTCGG TGCTGTTCTG TCCGACAACG GCGGTAAGCT GGTCGACCAG
GAGTACTGGG GCGTGAAAAC CATGGCCTAC AAGATCAACA AAAACCGCAA GGGCCACTAT
GCCTTCCTGC GCTCCGACGC CCCGTCGTCG GCCGTTCAGG AAATGGAGCG CCTGATGCGT
CTGCATGATG ACGTGATGCG CGTTCTGACC ATCAAGGTCG AAGAGCACGC CGAAGGCCCC
TCGGTCCAGA TGCAGAAACG TGACGAACGC GACAACCGTC GCGAGCGCCG CTGA
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| Protein sequence | MPLYEHVMIA RQDLSNSQAE GLIEHFGAVL SDNGGKLVDQ EYWGVKTMAY KINKNRKGHY
AFLRSDAPSS AVQEMERLMR LHDDVMRVLT IKVEEHAEGP SVQMQKRDER DNRRERR
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