Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0990 |
Symbol | |
ID | 4078152 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1061024 |
End bp | 1062349 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638006294 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_612985 |
Protein GI | 99080831 |
COG category | [S] Function unknown |
COG ID | [COG1520] FOG: WD40-like repeat |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGGCAA TTCCAGGTGG CTTTGGCCTG CGCGCGGGCG TGATGGCGAC GGCGATGGCG GCTCTCTTGA TGGGCTGCGC AGAGCCGGAG GAGATCCTGC GCGGCCCCCG CGAAGACATC CGCGCCGAAG CCCGGGGCGG AGAGTTCGAA AACCGCTCGG TCGCCATCTC ATTGCCCCGC GTCGTGACCA ACACCGCGTG GCAGCAAAGT CCGGGTCAGC CGACCACGCG CACCGCCCAT GCGGCGCTCT CGGCGGCACC GGCGCTGGTC TGGTCCACCA ATATTGGCGC AGGAGACAGC CGCAAACAGC GCATCACCGC AGCTCCCGTG GTGGGCGGAG GCCGGATCTA TACGCTCGAT GCGGCCTCGA CCGTATCTGC GGTATCGCCC GCTGGCGCCG TCTTGTGGCA GCACACCATC GAGCCGGCCA GTGATGATGC GGACGATGCC ACGGGAGGCG GCATCGCTTA CGCGGATGGC GTGCTTTATG TGTCGTCGGG CTTTGGCGTC CTGAGCGCGC TTGATGCAAA AACCGGCGCG CCGGTGTGGC GACAGGAACT GGACGCAACC GGCTCTGGCA GCCCCACGAT TCGCGATGGG CTTCTGTATC TGGTGGCCGG GGATGACACC GCCTGGGTGA TTGACACGAA GGATGGGCGT ATCGCCTGGC AACTGGAAGC GACGCCAAGC GCGTCCAACA TCCTGGGCGC TCCGGCGCCT GTGGTGGGCT CCGAGATCTC GATCTTTGCC TTTGGCTCGG GGGATCTGAT CGGCACGTTC CGTCGCGGAG GGTTCCGCCG CTGGATCGCA TCTGTGTCTG GTGCGCGCAC CGGGAGCGCG ATTTCGCAGA TCGGAGATGT GACCGGCGCC CCCTTCATGG ATGGCAATCG CGTCTATGTC GGCAACCAGT CGGGGCGTAC CGCGGCCTTT GATGTGGCCT CGGGCGATCG CCTCTGGACC GCGTTTGAAG GCACGTTCGG CCCGGTCTGG GCGACGGGCG GTAGCCTGTT CTTTGTCAGT GACCGCAGCC AGCTGATGCG CCTCAGTGCC AATGATGGCA GTCCGATCTG GTCTGTGGAT CTGCCGGGCT ACCTGAAAGA CAAGCCCCGC AAACGTGCAG AGATCGTAGC GCATCACGGC CCCATTCTCG CTGGCGGTCA ACTGGTGGTG GCCTCCAATG ATGGGCTTTT GCGCTTCTTT GATCCGGTCG ATGGACGGCA GACCCGCACC GTCGAGATCA AGGGCGGTGC CACGACGGAG CCCGTCGTGG CCAATGGCAC GCTTTATGTG GTGACGCGTG ATGGCCAACT GGCGGCCTTT CGCTAA
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Protein sequence | MMAIPGGFGL RAGVMATAMA ALLMGCAEPE EILRGPREDI RAEARGGEFE NRSVAISLPR VVTNTAWQQS PGQPTTRTAH AALSAAPALV WSTNIGAGDS RKQRITAAPV VGGGRIYTLD AASTVSAVSP AGAVLWQHTI EPASDDADDA TGGGIAYADG VLYVSSGFGV LSALDAKTGA PVWRQELDAT GSGSPTIRDG LLYLVAGDDT AWVIDTKDGR IAWQLEATPS ASNILGAPAP VVGSEISIFA FGSGDLIGTF RRGGFRRWIA SVSGARTGSA ISQIGDVTGA PFMDGNRVYV GNQSGRTAAF DVASGDRLWT AFEGTFGPVW ATGGSLFFVS DRSQLMRLSA NDGSPIWSVD LPGYLKDKPR KRAEIVAHHG PILAGGQLVV ASNDGLLRFF DPVDGRQTRT VEIKGGATTE PVVANGTLYV VTRDGQLAAF R
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