Gene TM1040_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0990 
Symbol 
ID4078152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1061024 
End bp1062349 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content65% 
IMG OID638006294 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_612985 
Protein GI99080831 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCAA TTCCAGGTGG CTTTGGCCTG CGCGCGGGCG TGATGGCGAC GGCGATGGCG 
GCTCTCTTGA TGGGCTGCGC AGAGCCGGAG GAGATCCTGC GCGGCCCCCG CGAAGACATC
CGCGCCGAAG CCCGGGGCGG AGAGTTCGAA AACCGCTCGG TCGCCATCTC ATTGCCCCGC
GTCGTGACCA ACACCGCGTG GCAGCAAAGT CCGGGTCAGC CGACCACGCG CACCGCCCAT
GCGGCGCTCT CGGCGGCACC GGCGCTGGTC TGGTCCACCA ATATTGGCGC AGGAGACAGC
CGCAAACAGC GCATCACCGC AGCTCCCGTG GTGGGCGGAG GCCGGATCTA TACGCTCGAT
GCGGCCTCGA CCGTATCTGC GGTATCGCCC GCTGGCGCCG TCTTGTGGCA GCACACCATC
GAGCCGGCCA GTGATGATGC GGACGATGCC ACGGGAGGCG GCATCGCTTA CGCGGATGGC
GTGCTTTATG TGTCGTCGGG CTTTGGCGTC CTGAGCGCGC TTGATGCAAA AACCGGCGCG
CCGGTGTGGC GACAGGAACT GGACGCAACC GGCTCTGGCA GCCCCACGAT TCGCGATGGG
CTTCTGTATC TGGTGGCCGG GGATGACACC GCCTGGGTGA TTGACACGAA GGATGGGCGT
ATCGCCTGGC AACTGGAAGC GACGCCAAGC GCGTCCAACA TCCTGGGCGC TCCGGCGCCT
GTGGTGGGCT CCGAGATCTC GATCTTTGCC TTTGGCTCGG GGGATCTGAT CGGCACGTTC
CGTCGCGGAG GGTTCCGCCG CTGGATCGCA TCTGTGTCTG GTGCGCGCAC CGGGAGCGCG
ATTTCGCAGA TCGGAGATGT GACCGGCGCC CCCTTCATGG ATGGCAATCG CGTCTATGTC
GGCAACCAGT CGGGGCGTAC CGCGGCCTTT GATGTGGCCT CGGGCGATCG CCTCTGGACC
GCGTTTGAAG GCACGTTCGG CCCGGTCTGG GCGACGGGCG GTAGCCTGTT CTTTGTCAGT
GACCGCAGCC AGCTGATGCG CCTCAGTGCC AATGATGGCA GTCCGATCTG GTCTGTGGAT
CTGCCGGGCT ACCTGAAAGA CAAGCCCCGC AAACGTGCAG AGATCGTAGC GCATCACGGC
CCCATTCTCG CTGGCGGTCA ACTGGTGGTG GCCTCCAATG ATGGGCTTTT GCGCTTCTTT
GATCCGGTCG ATGGACGGCA GACCCGCACC GTCGAGATCA AGGGCGGTGC CACGACGGAG
CCCGTCGTGG CCAATGGCAC GCTTTATGTG GTGACGCGTG ATGGCCAACT GGCGGCCTTT
CGCTAA
 
Protein sequence
MMAIPGGFGL RAGVMATAMA ALLMGCAEPE EILRGPREDI RAEARGGEFE NRSVAISLPR 
VVTNTAWQQS PGQPTTRTAH AALSAAPALV WSTNIGAGDS RKQRITAAPV VGGGRIYTLD
AASTVSAVSP AGAVLWQHTI EPASDDADDA TGGGIAYADG VLYVSSGFGV LSALDAKTGA
PVWRQELDAT GSGSPTIRDG LLYLVAGDDT AWVIDTKDGR IAWQLEATPS ASNILGAPAP
VVGSEISIFA FGSGDLIGTF RRGGFRRWIA SVSGARTGSA ISQIGDVTGA PFMDGNRVYV
GNQSGRTAAF DVASGDRLWT AFEGTFGPVW ATGGSLFFVS DRSQLMRLSA NDGSPIWSVD
LPGYLKDKPR KRAEIVAHHG PILAGGQLVV ASNDGLLRFF DPVDGRQTRT VEIKGGATTE
PVVANGTLYV VTRDGQLAAF R