| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0984 |
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| Symbol | |
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| ID | 4078146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1052015 |
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| End bp | 1053841 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638006288 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_612979 |
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| Protein GI | 99080825 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0666136 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.983928 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCTTAG CATCTTGGTT CCGGAACATG CCCGTGAAGC GTAAGATCCT GCTTCCTGGG
ATGGCTGGAT TGCTCATGAT GATCTGCGTG ATCACGACTT ACTGGACTCA GCGCCTGTCG
ACGGCGCTCT ATAGCGGCTT TGAAGAGCAG GTCGCGCTGA CTGAGTCCTA CATCGCGGCG
CCCCTCGCGA CGGCCGCATG GAACTATGAT GGCGACTTGG CCAATACGAC ACTGGCTTCG
CTTGCCGAGC GCGAGTCCTT TGTGTTTGCG CGTGTGGTCA GCAGCGGCGA TGTGCTTGCC
GAAGCCTTCA AGGGAGAGGC GATGGAAGAG GCGTGGATCG CGCAATCTAC CAGTCTGCTT
GAATCCGATC AGGTGCGGCT GGAGGATGGC GATTTCACCT ACTTCAAGAC GCCCTTGATG
TTCGAAGGTG AAGAAGCCGG CAATATGGTC TGGGCGCTCG ACACCTCGAT CATTGCCAAC
CAGATCATGA ATGCCAACAT TATCGCGGCC AGCCTTGGTT TTGCGATTTT CGCAGGCTTT
TCGGTCGTCT TCTACCTCAT CGCAGTTGCG GTATCGCGCC CGATCGAGAA TGTGGTGACG
CATATTGACG CGCTGCAGCA CGGTGACACG ACGCGTGAAA TCCCCGAGGC GAACCGCCGT
GATGAAATTG GCGCATTGGG CAAGGCGCTG GTCGATTTCC GCGACACATC CGCCGAGCAG
AAGCGCATGG AAGAAGAAAA ACGCAAGCAG GACGCGGTGC AGGAACATGT CGTGACCGTT
CTCTCCGAGG CGCTTGGCAA GCTGTCCACC GGCGACCTCA CGGTGAGCAT CAAGGACGAT
TTCCCGGCGG ATTACGAGAA GCTCAGCAAG GATTTCAACG CTCTGGTCAA TCGCCTGTTC
GATACGGTTT CGGCTGTGGT CGATGCGGCG GACAGCATCC AGAACGGTTC CACCGAGATC
AGCTCGGCCT CTGACGATCT TGCGCGCCGC ACCGAGAGCC AGGCGGCCAC CCTTGAAGAA
ACCGCTGCTG CACTGGATGA GCTGACTGCA TCGGTGCGTC AGGCCGCCGA AGGGGCTGGA
AGCGTGTCCA ACACCATGGA AGAGGCAAAA GCCGAAGCCG TGAACAGCGG CACCATCGTC
AACAATGCCG TTTCGGCCAT GACCGAGATC GAGCAATCCT CGAATCACAT CTCTCAGATC
ATCGGCGTGA TTGATGACAT TGCCTTCCAG ACCAACCTTC TGGCGCTGAA CGCGGGTGTC
GAAGCCGCGC GTGCAGGTGA AGCAGGGCGC GGGTTTGCCG TGGTGGCCTC CGAGGTGCGC
GCCTTGGCGC AACGCTCCTC CGATGCAGCC ATGGAGATCA AGACCCTCAT CGGCGACAGC
TCCAAACAGG TGGAACGTGG TGTGGATCTC GTCGGCAAGG CAGGCGATGC GCTTCACAAC
ATCGTTGAGC GTGTCACCCA GATCTCCGGC CTGATCTCTG ACATTGCACA AGGCGCGAGC
GAGCAATCCG CAGGTCTTGG CGATATCAAC AGCGGCATGG TGGAACTGGA TCAGGTGACC
CAGCAGAACG CCGCCATGGT GGAAGAGGCG ACTGCCGCGA GCCATATGCT CAAGGCCAAT
GCGGTCAACC TCGCGCAGAT GGTTGCTCAT TTCCAGCTCG GCGCCGGTGG GCGCGCGGCT
TCTGCTGCTC CAGCCCCTGC TGCAAAGGAT GCCGAGACGA TCGCGCCGTC GGCCCATGGC
GAGGATTGGG ACTATACGCC CGAACCAAGT CAGGTGGCCG TCGCCAGCAG CGGCAACGCG
GCGGCGAAGA TCTGGGAAGA CTTCTGA
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| Protein sequence | MFLASWFRNM PVKRKILLPG MAGLLMMICV ITTYWTQRLS TALYSGFEEQ VALTESYIAA
PLATAAWNYD GDLANTTLAS LAERESFVFA RVVSSGDVLA EAFKGEAMEE AWIAQSTSLL
ESDQVRLEDG DFTYFKTPLM FEGEEAGNMV WALDTSIIAN QIMNANIIAA SLGFAIFAGF
SVVFYLIAVA VSRPIENVVT HIDALQHGDT TREIPEANRR DEIGALGKAL VDFRDTSAEQ
KRMEEEKRKQ DAVQEHVVTV LSEALGKLST GDLTVSIKDD FPADYEKLSK DFNALVNRLF
DTVSAVVDAA DSIQNGSTEI SSASDDLARR TESQAATLEE TAAALDELTA SVRQAAEGAG
SVSNTMEEAK AEAVNSGTIV NNAVSAMTEI EQSSNHISQI IGVIDDIAFQ TNLLALNAGV
EAARAGEAGR GFAVVASEVR ALAQRSSDAA MEIKTLIGDS SKQVERGVDL VGKAGDALHN
IVERVTQISG LISDIAQGAS EQSAGLGDIN SGMVELDQVT QQNAAMVEEA TAASHMLKAN
AVNLAQMVAH FQLGAGGRAA SAAPAPAAKD AETIAPSAHG EDWDYTPEPS QVAVASSGNA
AAKIWEDF
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