| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0980 |
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| Symbol | |
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| ID | 4078142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 1047285 |
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| End bp | 1049105 |
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| Gene Length | 1821 bp |
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| Protein Length | 606 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638006283 |
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| Product | ABC transporter related |
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| Protein accession | YP_612975 |
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| Protein GI | 99080821 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCGA TGGACGATCC AACCGCCGCC GAAGAACGTC GCTCCGGGCT GCGCACGCTG
CGCAAGGTGT GGCCCTATGT CTGGCCAGAG CAGGGGCGTG CGGTGAAGAT CCGCGTGCTG
CTAGCGCTTC TGGTGCTGGT TGCGGCCAAG GGCATCGCGG TGGTGACGCC AATCTTTTAC
AAGGGTGCGG TGGATGCGCT GGCGGGCGAG GGCGTGCCGG TGCTGGCGCT TGGGGCCATT
GGTCTCACGG TGGCCTATGG CATGGCGCGG GTGATGAACA CCGGCTTTCA GCAGCTTCGG
GATGTGATCT TTGCGCCCGT CACGCAGCGG GCACTGCGGC GGCTGGCGAT CACCACCTTT
CGCCACATCC ACGCGATGTC CATGCGCTAC CATATCACCC GCAAGACCGG CGGGCTCAGC
CGGATTATTG AGCGTGGCGT CAAAGGGGTA GAGTTCCTTT TGCGCTTTCT GGTGCTCTCC
ATCGGGCCGC TGCTCTTGGA GCTGACGCTG GTCGCTGTGG TGCTCGCATG GTGGTTTGAC
ATCTGGTATC TCGTTGCCGT TGCGGTGACC GTGGCGCTCT ATGTCTGGTT CACCTTTGCT
GTGACCGAAT GGCGGGTGAA GCTGCGCCGC GAGATGAACC GCCAGGATAC CGACGCCAAT
CAAAAGGCGA TCGACAGTCT CTTGAACTAT GAGACGGTCA AGTATTTCGG CGCCGAGGAC
CGCGAGGCGG CCCGCTACGA TGTCGCGATG AAAGGCTACG CCGAGGCGGC CCTTAAAACC
GCCTATTCGC TGGGCGCTCT TAATTTCGGC CAGGCTGTGA TTATTACCAC GGGGCTTGTG
AGCGTGATGG TGATGGCGGC GATGGGGGTG GAACGCGGCG CGATGACGGT TGGCGATTTC
GTCATGGTCA ACGCCTATAT GATCCAGATC ACCGGGCCGT TGGGCTTCTT GGGGACTGTC
TACCGCGAGA TCCGCCAAAG CCTTGTGGAT ATGGGCGAGA TGTTTGATCT GCTCGATCAG
CCGCCGGATG TGCAAGATGC AACCGACGCC CGTGCGCTGC AGGTGAGCGG CGGCCAAATC
CAGCTGGAAA ACGTGCGCTT TGGCTATGAC CCTGAGCGCG AGATTCTAAA AGGCGTCTCC
CTCACTGTGG AGGCCGGGCA GACGGTTGCC ATCGTGGGTT CGACGGGCTC GGGAAAATCC
ACCATCGGGC GGCTCTTGTT CCGGTTTTAC GATGTGAGCG CCGGGCGGTT GCTGATCGAC
GGTCAGGATG TGCGCGAGGT TACGCAAAAG AGCCTGCATG CCGCCATCGG CGTCGTACCG
CAGGACACCG TGCTATTTAA CGATACCATC CGCTACAACA TTGCGTATGG CCGCGATGGG
GCGACCGAGG CTGATATCGT GGAGGCCGCG CGCGCGGCCC AGATTCATGA TTTCATCGAA
GGCCTTCCAC AGGGCTATGA CACCCCGGTC GGGGAACGCG GCCTGAAGCT CTCGGGCGGT
GAAAAACAGC GCGTCGGGAT TGCCCGAAGC CTGCTGAAGA ACCCGCCAAT CCTCTTGCTG
GACGAGGCGA CCTCGGCCCT TGATACCGAC ACCGAGCAAG AGATCAAAGG CGCATTGGCG
CGCGCGGGGC AGGGCCGTAC CGTGATCACC ATCGCGCACC GCCTGTCTAC CATCGCTGAG
GCAGATCGCA TTGTCGTTCT TGAGCAGGGG GAGGTGGTGG AAACTGGCAC CCACGAGGCT
CTGCTGGCAG AGGGTGGCCG CTATGCGCAG CTCTGGCAGC GTCAGCAGGC GGATCGGGAC
ATGGCCTCGG GCGCGGCCTG A
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| Protein sequence | MPPMDDPTAA EERRSGLRTL RKVWPYVWPE QGRAVKIRVL LALLVLVAAK GIAVVTPIFY
KGAVDALAGE GVPVLALGAI GLTVAYGMAR VMNTGFQQLR DVIFAPVTQR ALRRLAITTF
RHIHAMSMRY HITRKTGGLS RIIERGVKGV EFLLRFLVLS IGPLLLELTL VAVVLAWWFD
IWYLVAVAVT VALYVWFTFA VTEWRVKLRR EMNRQDTDAN QKAIDSLLNY ETVKYFGAED
REAARYDVAM KGYAEAALKT AYSLGALNFG QAVIITTGLV SVMVMAAMGV ERGAMTVGDF
VMVNAYMIQI TGPLGFLGTV YREIRQSLVD MGEMFDLLDQ PPDVQDATDA RALQVSGGQI
QLENVRFGYD PEREILKGVS LTVEAGQTVA IVGSTGSGKS TIGRLLFRFY DVSAGRLLID
GQDVREVTQK SLHAAIGVVP QDTVLFNDTI RYNIAYGRDG ATEADIVEAA RAAQIHDFIE
GLPQGYDTPV GERGLKLSGG EKQRVGIARS LLKNPPILLL DEATSALDTD TEQEIKGALA
RAGQGRTVIT IAHRLSTIAE ADRIVVLEQG EVVETGTHEA LLAEGGRYAQ LWQRQQADRD
MASGAA
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