| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0945 |
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| Symbol | pdxA |
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| ID | 4077339 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 1007596 |
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| End bp | 1008576 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638006248 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_612940 |
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| Protein GI | 99080786 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.554784 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.885332 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGGCG CGCCGCAGGT CATTGCTCTC TCCTGCGGCG AACCTGCCGG GATCGGCCCG
GAAATCGCTG TCGCCGCATG GGATCAACTG CGCGCGGACT GCCCCTTCGT CTGGATCGGC
GATCCGCGTC ACCTGCCCTC ATCCCACCCT TGGCAACCCG TCTCTGCCCC CGCAGAGGCG
TTGCAAGTCA GCGCAGATGC GCTGCCGGTA TGGCCCTTGG AATTTGCCGG AAACACCACC
AAGGGCGAGG CCGACCCGCA AAACGCATCA GGTGTGATCC AATCGATCAA GACCGGTGTG
GAGCTTGTAA CTTCGGGCAA GGCCGCAGCG CTCTGCACGG CTCCGATCCA CAAAAAAGCG
CTGATTGATG GCGCCGGCTT TGCCTATCCC GGCCACACCG AGTTCCTCGC AGCCCTTGGA
GGGGTCGACC ATGTGGTGAT GATGCTGGCC AGCGCCGCTC TTCGGGTGGT GCCAGCCACC
ATCCACATTC CGCTGAGCGC CGTGCCCGAA GTGCTGACAC CAGACCACCT GCGCCGCGTC
ATCACCCTTA CAGACCGTGG CCTGCGCGAC CAGTTCGGTC TCACCGCCCC GCGCATCGCC
GTCACTGGCC TCAACCCGCA TGCAGGCGAA GGCGGGGCCA TGGGCCAGGA AGAAGGTGAC
TGGATCGAAG CACTGATCCG CGAGATGCAG ACCGAAGGCT ACCGGCTCAC CGGTCCCCAT
CCGGCAGACA CATTGTTTCA CGCCGCCGCC CGCGCGCGCT ATGACGCGGC CATCGCGATG
TATCACGATC AGGCGCTCAT CCCGATCAAG ACGCTCGACT TCGACAAGGG CGTCAATGTC
ACCCTTGGCC TGCCCTTCAT CCGCACATCC CCCGATCACG GCACCGCGTT CGACATCGCT
GGCAAAGGTC TTGCCAATCC CTCCAGCCTC ATCGAAGCCC TGCGTCTGGC GCAAACCATG
GCCAAGACCC GCCAGCCCTG A
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| Protein sequence | MTGAPQVIAL SCGEPAGIGP EIAVAAWDQL RADCPFVWIG DPRHLPSSHP WQPVSAPAEA
LQVSADALPV WPLEFAGNTT KGEADPQNAS GVIQSIKTGV ELVTSGKAAA LCTAPIHKKA
LIDGAGFAYP GHTEFLAALG GVDHVVMMLA SAALRVVPAT IHIPLSAVPE VLTPDHLRRV
ITLTDRGLRD QFGLTAPRIA VTGLNPHAGE GGAMGQEEGD WIEALIREMQ TEGYRLTGPH
PADTLFHAAA RARYDAAIAM YHDQALIPIK TLDFDKGVNV TLGLPFIRTS PDHGTAFDIA
GKGLANPSSL IEALRLAQTM AKTRQP
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