Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0889 |
Symbol | |
ID | 4075986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 949911 |
End bp | 950897 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638006191 |
Product | luciferase-like |
Protein accession | YP_612884 |
Protein GI | 99080730 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | [TIGR03558] luciferase family oxidoreductase, group 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.761673 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.656027 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTATT CCGTCCTCGA TCTCGCCCCG GTGCCAGAAG GCGCCACCAC TGCAGAGGCG CTCGCCAATA GCGCCGACCT CGCCCGACAC GCCGAACGCT GGGGCTATCA CCGCTACTGG CTGGCGGAGC ATCACAACAT GCCCGGCATT GCGAGCGCGG CAACGGCGGT GATGATCGGC CATATTGCAC AGGCAACCTC GACCATCCGG GTTGGCGCGG GCGGCATCAT GCTGCCCAAT CACGCGCCCT ACATGGTGGC CGAAGCCTTT GGTACCCTTG TAGAAATTCA CGGCGACCGG ATCGACCTCG GCGTTGGGCG CGCACCGGGC ACGGATATGG CGGCGATGCG GGCGATGCGG CGCGGGTTGC AGGACTCCGG CGATCGCTTC CCCGAGGACG TGCAGGAGCT CATCTCCCAT CTCGGCCCCC GCCGCACAGA GAGCAATCTG CGCGCCATCC CCGGTGAGGG CACCGAGGTT CCAGTCTGGA TGCTGGGGTC GAGCCTTTAC GGGGCACAGC TCGCCGCCAT GCTGGGGCTG CCTTATGCCT TTGCCTCGCA TTTTGCGCCC CAAGCGCTCT CGCAGGCCTT TGAGGTCTAT CGCCGCCAGT TTCGCCCCTC AAAGACGCTA CAAAAGCCGC ATGCGATGCT GGCGGTCAAC GTCTTTGCCG CCGCCACGGA TGCAGAGGGC ATCCGGCTGC GCACCACCAT GCAGCAAGCC TTTGCCCGGT TGCGCCTTGG CACCCCGGGC AAGCTGCCTG CCCCGGTAGA GAATATCGCA GATGTGCTGA CGCCGGACAT TCTTGCCGGG GTCAATCAGG CGCTGACGAT TTCGGCGGTT GGCGCAAAGG ACAGTGTGCG CGAAGATCTG GCACGGCTCA TTGAGACCTA CCAGCCCGAC GAGGTGATCC TGACCGGGCA GATCCATGAC CATGACGCGC GGCTGCGCTC GTTTGAGATC GCGGCAGAGA TCCTGGGGAA CAGCTAG
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Protein sequence | MRYSVLDLAP VPEGATTAEA LANSADLARH AERWGYHRYW LAEHHNMPGI ASAATAVMIG HIAQATSTIR VGAGGIMLPN HAPYMVAEAF GTLVEIHGDR IDLGVGRAPG TDMAAMRAMR RGLQDSGDRF PEDVQELISH LGPRRTESNL RAIPGEGTEV PVWMLGSSLY GAQLAAMLGL PYAFASHFAP QALSQAFEVY RRQFRPSKTL QKPHAMLAVN VFAAATDAEG IRLRTTMQQA FARLRLGTPG KLPAPVENIA DVLTPDILAG VNQALTISAV GAKDSVREDL ARLIETYQPD EVILTGQIHD HDARLRSFEI AAEILGNS
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