Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0863 |
Symbol | |
ID | 4076233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 917168 |
End bp | 917932 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638006165 |
Product | DSBA oxidoreductase |
Protein accession | YP_612858 |
Protein GI | 99080704 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1651] Protein-disulfide isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00216121 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGCCC CGACACGCAT GGCCCTGATC GCGGCCTGCG CGCTCTCTCT CTCTGCTCCG GCAGCGCGGG CGCTTGACCT CAACGACATG TCCGACAGCG AAAAGGCCGC CTTTGGCGAT GCCGTGCGCA GCTATCTCCT GGAGAACCCG CAGGTGATCC TGGAGGCGGT GGACGTCCTC GAACAACAGC AGCAACAGGC CGAGGCCGCG CGCGATGACG CGCTGGTGGG CGCCAACCTG CAGGAAATCC AGAACGATGG CTATTCCTGG GTGGGCGGCA ACCCCGAAGG CGATGTGACG CTGGTTGAAT TCATGGATTA CCGCTGTGGC TATTGCCGCA AGGCGGTGCC CGAAATCGAG GCTCTTTTGG CGGCGGATAA GAATATTCGT TTTGTCATCA AAGAGTTCCC AATCCTCGGC GAGGCGTCTG TGCTCTCATC CCGGTTTGCG ATTGCCACCA AACTTGTGGC TGGTGATGAC GCTTACAAGA GCGTGCATGA CACGCTGATC GCGTTTCAGG GCGAGCCCAA TGAGGTGGCG TTGCGTCGTA TGGCGGAGGG GCTGTCGCTT GACGCGGATG CAATCCTCGC CAAGATGAAC GACGCAAAAG TGACAGAGCA GATCCAGCGC ACGCGCAGCC TGGCGCAGAC GCTGTCCATT TCTGGCACGC CCACCTTTGT TCTGGAAGAC GAGATGCTGC GCGGCTACCT GCCCGCAGAT CAGTTGCAGA TCATGGTGGA GGACATACGC GCCGGGCGCA GCTGA
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Protein sequence | MIAPTRMALI AACALSLSAP AARALDLNDM SDSEKAAFGD AVRSYLLENP QVILEAVDVL EQQQQQAEAA RDDALVGANL QEIQNDGYSW VGGNPEGDVT LVEFMDYRCG YCRKAVPEIE ALLAADKNIR FVIKEFPILG EASVLSSRFA IATKLVAGDD AYKSVHDTLI AFQGEPNEVA LRRMAEGLSL DADAILAKMN DAKVTEQIQR TRSLAQTLSI SGTPTFVLED EMLRGYLPAD QLQIMVEDIR AGRS
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