Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0860 |
Symbol | |
ID | 4076035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 913262 |
End bp | 914491 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638006162 |
Product | 5-aminolevulinate synthase |
Protein accession | YP_612855 |
Protein GI | 161899030 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
TIGRFAM ID | [TIGR01821] 5-aminolevulinic acid synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.63511 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTGG ACTATACCGC ACAACTCGAC GCAGCGATTG AACGCCTTCA CGAAGAAGGC CGCTACCGGA CGTTCATTGA TATCGAGCGT CGCCGGGGGC AGTTTCCGCA TGCGGTCTGG ACCCGTCCCG ATGGCAGCGA ACAGGACATC ACCGTCTGGT GCGGCAACGA CTATCTCGGC ATGGGGCAGC ACCCGGTTGT GCTGAAGGCG ATGCGCGATG CAATTGATGC CACTGGTGCG GGCTCTGGCG GGACGCGCAA TATCTCCGGC ACCACTGTCT ATCACAAAGA ACTCGAGAGC GAGCTTGCCG ATCTGCACGG CAAGGAAGCG GCGCTTTTGT TCACCTCCGC CTACATTGCC AACGATGCCA CGCTGTCGAC CCTGCCGAAA CTGCTGCCGG GTCTCATTAT CTATTCCGAC GCTTTGAACC ACGCGTCCAT GATCGAGGGT GTGCGCCGAA ATGGCGGGGC CAAGCGAGTC TTTCGCCATA ATGATGTCGC CCACCTGCGC GAACTCCTCG AGGCTGACGA TCCCGCCGCG CCCAAGCTCA TCGCATTTGA GAGCGTCTAC TCGATGGATG GCGACTTTGG CCCGATTGCG GAAATCTGCG ATCTCGCCGA TGAATTCAAC GCGCTGACCT ATATCGACGA AGTCCACGCC GTCGGCATGT ATGGCCCTCG CGGCGGTGGC GTCACAGAGC GTGACAACCT CGCCCATCGT ATCGACATCA TCAACGGCAC GCTCGCCAAG GCCTATGGCG TCATGGGCGG CTATATCGCC GCCTCTGCCA AGATGTGCGA TGCGATCCGG TCCTATGCGC CGGGCTTTAT CTTCACCACC TCGCTTGCGC CTTCGATTGC GGCCGGGGCC GCGGCCTCCG TGCGTCATCT CAAGACAGCG CAGGACCTGC GCGATAAGCA TCAGGAGCAG GCGCGCTATC TCAAAACCCG CCTCAAGATG ATGGGACTGC CCGTGATCGA TCACGGCAGC CACATCGTTC CGGTGATCGT TGGCGATCCG GTTCATACCA AGAAACTGTC GGATATGTTG CTCTCGGACT TTGGTATCTA TGTGCAGCCG ATCAACTTCC CGACCGTGCC GCGTGGTACA GAGCGCCTAC GATTCACGCC ATCGCCAGTG CATGGGCCCA GCGAAATGGA CCATTTGATC CGCGCAATGG ATAAGCTTTG GTCGCATTGT GCGCTGAATC GCGCCGAATT GGCCGGATAA
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Protein sequence | MTVDYTAQLD AAIERLHEEG RYRTFIDIER RRGQFPHAVW TRPDGSEQDI TVWCGNDYLG MGQHPVVLKA MRDAIDATGA GSGGTRNISG TTVYHKELES ELADLHGKEA ALLFTSAYIA NDATLSTLPK LLPGLIIYSD ALNHASMIEG VRRNGGAKRV FRHNDVAHLR ELLEADDPAA PKLIAFESVY SMDGDFGPIA EICDLADEFN ALTYIDEVHA VGMYGPRGGG VTERDNLAHR IDIINGTLAK AYGVMGGYIA ASAKMCDAIR SYAPGFIFTT SLAPSIAAGA AASVRHLKTA QDLRDKHQEQ ARYLKTRLKM MGLPVIDHGS HIVPVIVGDP VHTKKLSDML LSDFGIYVQP INFPTVPRGT ERLRFTPSPV HGPSEMDHLI RAMDKLWSHC ALNRAELAG
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