Gene TM1040_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0823 
Symbol 
ID4077529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp866908 
End bp867261 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content63% 
IMG OID638006121 
Producthypothetical protein 
Protein accessionYP_612818 
Protein GI99080664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.00716982 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.247171 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGAC AGACGGGCTC TTCGTCTAAC TGGTACATCC GCCGCGGGGA CGGATACCTA 
ACCACATCTG AAATCGCATG GGAGATCGGG GCCAAGGGCT CCGGTCTCTT TCTCTACGTG
CCTCCGGGCT TTGCCTTTGA CGTCTCGATT CCTCGCTGGG CCGGGTGGAT CTTCGACCGG
CACGATCCCC GCTATCTCAA AGCCGCCGCG CTGCATGATT ACGCCCTCCA CCGGCTCGGC
TGGGGGCGGG TCAGCGCGGC TGCACCCTTT TCCGAAGCGC TGCGCGCCGC TGGCGTCTCG
CGCATCCGCA GGCTGGCAAT GGTTCTGGCC GTCACTATCC ACAAATGGAG ATGA
 
Protein sequence
MSRQTGSSSN WYIRRGDGYL TTSEIAWEIG AKGSGLFLYV PPGFAFDVSI PRWAGWIFDR 
HDPRYLKAAA LHDYALHRLG WGRVSAAAPF SEALRAAGVS RIRRLAMVLA VTIHKWR