Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0823 |
Symbol | |
ID | 4077529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 866908 |
End bp | 867261 |
Gene Length | 354 bp |
Protein Length | 117 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638006121 |
Product | hypothetical protein |
Protein accession | YP_612818 |
Protein GI | 99080664 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00716982 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.247171 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAGAC AGACGGGCTC TTCGTCTAAC TGGTACATCC GCCGCGGGGA CGGATACCTA ACCACATCTG AAATCGCATG GGAGATCGGG GCCAAGGGCT CCGGTCTCTT TCTCTACGTG CCTCCGGGCT TTGCCTTTGA CGTCTCGATT CCTCGCTGGG CCGGGTGGAT CTTCGACCGG CACGATCCCC GCTATCTCAA AGCCGCCGCG CTGCATGATT ACGCCCTCCA CCGGCTCGGC TGGGGGCGGG TCAGCGCGGC TGCACCCTTT TCCGAAGCGC TGCGCGCCGC TGGCGTCTCG CGCATCCGCA GGCTGGCAAT GGTTCTGGCC GTCACTATCC ACAAATGGAG ATGA
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Protein sequence | MSRQTGSSSN WYIRRGDGYL TTSEIAWEIG AKGSGLFLYV PPGFAFDVSI PRWAGWIFDR HDPRYLKAAA LHDYALHRLG WGRVSAAAPF SEALRAAGVS RIRRLAMVLA VTIHKWR
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