| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0775 |
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| Symbol | |
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| ID | 4078087 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 829194 |
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| End bp | 831602 |
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| Gene Length | 2409 bp |
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| Protein Length | 802 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638006072 |
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| Product | Lon-A peptidase |
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| Protein accession | YP_612770 |
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| Protein GI | 99080616 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La
[TIGR00764] lon-related putative ATP-dependent protease |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.577145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0448115 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGAGC CTCTCAATTC CTCCTACCCC GTACTGCCGC TGCGCGACAT TGTGGTCTTT
CCCCACATGA TCGTGCCGCT GTTCGTGGGC CGGGAGAAGT CGGTACATGC CCTCGAAGAA
GTCATGTCCG ATGACAAGCA GATCCTCTTG TCCAGCCAGA TCGATCCCTC TGAGGACGAC
CCGGATCAGG ACGGGATCTA CCGCACCGGC GTGCTGGCCA ATGTTCTGCA ACTGCTGAAA
CTGCCCGATG GTACCGTGAA GGTGCTCGTC GAGGGCCACC AGCGGGTGAA GATCACCGAG
TTTCTGGACA ATGAGACCTT CTTTGAGGCC CGCGCCGAGG CACTGTCGGA GATGCCAGGC
GATGTGACCA CCACTGAGGC GCTTTTGCGC GCGGTCGGCG ATGAGTTCGA GCGCTACGCC
AAAGTGCGCA AGAACATCCC CGAGGAAGCC CTAACAGCCG TGGGTGAAAC CACCGAACCT
GCAAAGCTGG CGGACCTCGT GGCCGGTCAC TTGGGCATTG AGGTCGAGCG CAAGCAGGAA
CTGCTTGAGA CGCTCCCGAT CAGTGAACGT CTGGAGAAGG TCTATGCCCT GATGCAGTCC
GAACTCTCGG TGCTGCAGGT GGAGAAAAAG ATCAAGACCC GCGTCAAGAC GCAGATGGAG
AAGACCCAGC GAGAATACTA CCTGAATGAG CAGATGAAAG CCATTCAGAA GGAGCTGGGC
GACGGCGAGG ATGGCGCTGG CGAAATTGCC GAACTCGAAG AAAAGATCGA AGGCACAAAG
CTCTCGAAAG AGGCCCGTGA AAAGGCCGAT GCCGAGATCA AGAAGCTCAA GAACATGTCG
CCGATGTCGG CCGAGGCCAC AGTCGTGCGC AACTATCTTG ACTGGATGCT GTCGATCCCG
TGGGGCACCA AATCCCGCGT CAAAAAAGAC CTTGGGCGCG CGCAGGACAT CCTCGACAAG
GACCACTATG GCCTTGAAAA GGTGAAGGAG CGCATCGTCG AATATCTCGC GGTTCAGCAG
CGTTCTGCCA AACTCAAAGG TCCGATCCTC TGCCTTGTTG GCCCTCCAGG AGTGGGTAAA
ACCTCGCTGG GCAAATCCGT GGCCAAGGCG ACGGGGCGCG AGTTCATCCG GATTTCTCTG
GGTGGCGTGC GCGACGAGTC CGAGATCCGC GGCCACCGCC GGACCTACAT CGGCTCCATG
CCGGGCAAGA TTATTCAGGC GCTGAAAAAG GCCAAGACGA CGAACCCGCT CATTCTGCTC
GACGAGATCG ACAAGATGGG CCAGGACTTC CGTGGGGACC CGGCTTCTGC GATGCTCGAA
GTGCTTGATC CGGAACAGAA TTCCACCTTT GTGGATCACT ATCTGGAGGT CGAATATGAC
CTCTCGAACG TGATGTTCCT GACCACCTCG AACAGCTACA ACATGCCGGG CCCGCTCTTG
GACCGGATGG AGATCATTCC GCTCTCCGGC TACACCGAGG ACGAGAAACG CGAGATTTCC
AAGCAGCACC TGATTTCCAA GCAGGTGAAG AACCACGGCC TCAAAGCTAA GGAATTCGAG
CTGACCGATG AGGCCCTCAC CGAGATCATC CGCACCTATA CTCGCGAGGC GGGCGTTCGG
AACCTCGAGC GTGAAATCGC CAAAGTGGCC CGCAAGGCGC TGACCTCCAT CGTCAAGAAG
GAGACCGAAA GCGTGAAGGT CACCCCTGAA AACCTCGGGG ATTTCCTGGG CGTTGCAAAA
TATCGTTATG GTCTTGCAGA GCTTGAGGAT CAGGTCGGTG TGGTCACCGG GCTTGCCTAT
ACCTCCGTTG GCGGTGAACT CTTGTCCATC GAGGCGCTGC GCCTGCCGGG CAAGGGCCGG
ATGAAAACCA CCGGTAAGCT GGGCGATGTG ATGAAAGAAT CCATTGAGGC AGCAAGTTCT
TACGTGCGCT CCGTCTCGCC GCGTCTGGGC ATCAAACCAC CGCGCTTTGA CAAATGGGAC
ATCCACGTTC ACGTCCCAGA GGGGGCAACA CCCAAGGATG GTCCCTCGGC AGGTCTGGCG
ATGGTGACCT CCATCGTGTC GGTGCTGACA GGAATTCCTG TGCGCAAGGA TATCGCCATG
ACCGGCGAGG TGACGCTGCG CGGCAATGCC CTCGCCATCG GGGGGCTGAA AGAAAAACTG
CTCGCAGCCT TGCGTGGCGG TATCAAAACC GTTCTCATCC CCAAGGAGAA CGAAAAAGAC
CTGCCCGAGA TCCCGGACAA CGTGAAAGAA GGGCTGGAGA TCATCCCGGT CGATCACGTC
TCCGAGGTTC TTAAGCATGC GCTGGTGAGC CAACCCGAAG CGATTGAGTG GGACGAGGAG
GCTGAAGAGG CCGCCGCCGC TGCCGCTGCG CTCAAGGGTG GCGACGCAAG CGGGGCAACG
GCGCACTAA
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| Protein sequence | MQEPLNSSYP VLPLRDIVVF PHMIVPLFVG REKSVHALEE VMSDDKQILL SSQIDPSEDD
PDQDGIYRTG VLANVLQLLK LPDGTVKVLV EGHQRVKITE FLDNETFFEA RAEALSEMPG
DVTTTEALLR AVGDEFERYA KVRKNIPEEA LTAVGETTEP AKLADLVAGH LGIEVERKQE
LLETLPISER LEKVYALMQS ELSVLQVEKK IKTRVKTQME KTQREYYLNE QMKAIQKELG
DGEDGAGEIA ELEEKIEGTK LSKEAREKAD AEIKKLKNMS PMSAEATVVR NYLDWMLSIP
WGTKSRVKKD LGRAQDILDK DHYGLEKVKE RIVEYLAVQQ RSAKLKGPIL CLVGPPGVGK
TSLGKSVAKA TGREFIRISL GGVRDESEIR GHRRTYIGSM PGKIIQALKK AKTTNPLILL
DEIDKMGQDF RGDPASAMLE VLDPEQNSTF VDHYLEVEYD LSNVMFLTTS NSYNMPGPLL
DRMEIIPLSG YTEDEKREIS KQHLISKQVK NHGLKAKEFE LTDEALTEII RTYTREAGVR
NLEREIAKVA RKALTSIVKK ETESVKVTPE NLGDFLGVAK YRYGLAELED QVGVVTGLAY
TSVGGELLSI EALRLPGKGR MKTTGKLGDV MKESIEAASS YVRSVSPRLG IKPPRFDKWD
IHVHVPEGAT PKDGPSAGLA MVTSIVSVLT GIPVRKDIAM TGEVTLRGNA LAIGGLKEKL
LAALRGGIKT VLIPKENEKD LPEIPDNVKE GLEIIPVDHV SEVLKHALVS QPEAIEWDEE
AEEAAAAAAA LKGGDASGAT AH
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