| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0701 |
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| Symbol | gatB |
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| ID | 4077368 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 749516 |
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| End bp | 751024 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005998 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit B |
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| Protein accession | YP_612696 |
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| Protein GI | 99080542 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0064] Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog) |
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| TIGRFAM ID | [TIGR00133] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0198645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCGACC TGACATATGA ACTCCCAAAG CCCAAGGTAA TCGCGGGCGC CAAGCATGAC
TGGGAACTGG TCATCGGTAT GGAGGTGCAT GCCCAGGTCA GCTCCAATGC CAAGCTGTTT
TCGGGCGCTT CCACCCAGTT TGGGGCGGAG CCCAACTCCA ACGTGGCATT TGTGGATGCG
GCCATGCCCG GCATGCTGCC CGTCATCAAC GAATACTGCG TCGAACAGGC GGTCCGCACG
GGTCTTGGCC TCAAGGCGGA TATCAACCTC TGGTCTGCCT TTGACCGCAA GAACTATTTT
TACCCCGACC TGCCGCAGGG CTATCAGATC TCCCAGCTCT ATCACCCCAT CGTGGGCGAA
GGCGAAGTGC TGGTAGAGCT TGGCGATGGC ACGGCGCGCA TGGTGCGTAT CGAGCGCATC
CACATGGAGC AGGACGCGGG CAAATCCATC CACGATATGG ACCCCTCCAT GTCCTTTGTG
GACCTGAACC GGACCGGCGT CTGCCTGATG GAAATCGTCT CGCGCCCGGA CATCCGTGGC
CCCGAGGAAG CGGCCGCCTA TATCGCCAAG CTGCGCCAGA TCATGCGTTA CCTTGGCACC
TGTGACGGCA ACATGCAGAA CGGCAACCTG CGCGCGGATG TGAACGTCTC CATCTGCCGC
CCCGGCGCCT ACGAGAAGTA TCAGGAAACG CAGGATTTCT CGCATCTCGG CACCCGCTGC
GAGATCAAGA ACATGAACTC CATGCGCTTT ATCCAGCAGG CCATCGAGGT CGAAGCACGT
CGCCAGATCG CCATTGTAGA AGCCGGTGGC GAAGTCGAGC AGGAAACCCG CCTTTACGAT
CCAGACAAGG GCGAGACGCG TTCGATGCGT TCCAAGGAAG AGGCGCATGA CTATCGCTAC
TTCCCCGACC CGGACCTTCT GCCGCTCGAG ATCGAGCAGG CTTGGGTAGA CGACATCAAG
TCGAAGCTCC CCGAACTGCC GGACGAAAAG AAAGCCCGTT TTATCAAAGA TTTCGGCCTT
ACAGACTATG ATGCGTCCGT GCTGACGGCG GATCTGGAGA GTGCGCATTA TTTTGACGCC
GTTGCAAAAG GTCGCAGCGG CAAGCTGGCG GCGAACTGGG TCATCAACGA ACTCTTTGGC
CGCCTGAAGA AGGACGACAA AGACATCACT GACAGCCCCG TCTCCCCGGC GCAACTGGGT
GGTGTGATTG ATCTGATCGC TTCTGACGCC ATCTCCGGCA AGATCGCCAA GGATCTGTTT
GAGATCGTTT ATACCGAAGG CGGAGACCCG GCCCAGATCG TCGAAGAACG TGGCATGAAG
CAGGTCACAG ACACCGGTGC GATTGAGGCG GCTCTGGACG AGATCATCGC CGCCAACCCC
GCACAGGTTG AAAAGGCCAA GGAAAACCCG AAGCTTGCGG GCTGGTTCGT CGGTCAGGTG
ATGAAAGCCA CCGGCGGCAA GGCCAACCCG AAGGCGGTGA ACCAGCTTGT AGCCAAGAAG
CTTGGCTAA
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| Protein sequence | MLDLTYELPK PKVIAGAKHD WELVIGMEVH AQVSSNAKLF SGASTQFGAE PNSNVAFVDA
AMPGMLPVIN EYCVEQAVRT GLGLKADINL WSAFDRKNYF YPDLPQGYQI SQLYHPIVGE
GEVLVELGDG TARMVRIERI HMEQDAGKSI HDMDPSMSFV DLNRTGVCLM EIVSRPDIRG
PEEAAAYIAK LRQIMRYLGT CDGNMQNGNL RADVNVSICR PGAYEKYQET QDFSHLGTRC
EIKNMNSMRF IQQAIEVEAR RQIAIVEAGG EVEQETRLYD PDKGETRSMR SKEEAHDYRY
FPDPDLLPLE IEQAWVDDIK SKLPELPDEK KARFIKDFGL TDYDASVLTA DLESAHYFDA
VAKGRSGKLA ANWVINELFG RLKKDDKDIT DSPVSPAQLG GVIDLIASDA ISGKIAKDLF
EIVYTEGGDP AQIVEERGMK QVTDTGAIEA ALDEIIAANP AQVEKAKENP KLAGWFVGQV
MKATGGKANP KAVNQLVAKK LG
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