Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0693 |
Symbol | |
ID | 4077360 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 743914 |
End bp | 745608 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638005990 |
Product | Cl- channel, voltage gated |
Protein accession | YP_612688 |
Protein GI | 99080534 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0559233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000374815 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGCGAC GGGAAAGTAG TCCCCTGTCT GAATATCTCG CCAATACCAA GGCGCGCTTG CGGGATGCCC GTCGTGTATT GGTTCACCGT GGACCAAGTC AGCTGCAATT CTGGTTGATT GCTCTGGTCA TTGGGGTGCT CGCTGGCTTT GCCGCTTTGT TCTTTCGCAA AGGCATTACC GCGCTACAAG GGGCCGTCTA CGGCGCCGAG GATGTGGACT ACCTGCATAG TTTCGCCGCA ACGCTGCCGT GGTACGTGCT GTTGCTGGTG CCGGTATTCG GCGGGTTGAT CGTCGGGATC ATTCTGCACC GCTTTACGCC AGACGGGCGG GTACGATCCG TCGCCGATGT GATCGAAGGC GCGGCCCTCA GAGATGGGCG CGTCGAGATC CGCGAGGGGT TGGCCTCGGC CTGCGCGTCC TTTTTGACCC TCTCGACCGG GGGCTCTTCC GGGCGCGAGG GGCCGGTGGT CCATATCGCA GGCATGATCT CTACCTGGGT GAGCGACCGC ATCCGTGCCG ATGGCATCAC TGGGCGGGAC CTCCTGGGTT GCGCGGTTGC GGCAGCGGTT TCTGCCAGTT TTAACGCCCC GATTGCCGGC GCTCTTTTTG CCATGGAAGT GGTGCTCAGG CATTTTTCCG TAAACACCTT CGCGCCCATC GTGGTGGCCT CGGTGGCAGG CACTGTCATC AATCGGCTTG AGTATGGGGA TGTCACGGAA TTTGTGCTCA CGACGCCCGG TGCGTTGCAA TTCTACGTCG AGTTGCCAGC GTTCCTGATG CTTGGTCTGA TCTGTGGCGT CGTCGCGGTT GTGCTGATGC ATTCAATCTT TTTGGCGGAT CGGGTGGGGA CGGCTGTGCA ATCGGCGCTT GGCATGCCGC GCTGGTTGCG CCCGACCGTA GCTGGGTTTT TGCTTGGTCT GGTCGCAATC TGGTATCCGC ATATCATTGG TGTTGGATAC GAGACGACCG TGCTCGCCCT GTCTGGGAGC CTGCTGCTCA GCCAGGCTAT CCTGTTCACG ATTGTCAAAG TGGCTGCAGT CTCCATCACC ATGGGCGGGC GCATGGGGGG CGGGGTGTTT TCCCCCTCGT TGATGGTTGG GGCGCTGACC GGGCTTGCCT TTGGCCTCAT TGCGACGAAT TTCCTGCCGG ATGTCTCGGG TACGCATACG CTCTATGCTT TTGCGGGGAT GGGCGCTGTC GCCGCTGCGG TGCTGGGTGC GCCCATTTCG ACCACGCTCA TTGTGTTTGA ACTGACAGGC GACTGGCAGA TCGGCCTTGC GGTGATGGTA TCGGTGTCGA TGTCCACGGC GTTGGCCTCG CGGATGGTGG ACCGCTCGTT CTTCCTGACC CAGCTTGAAA AACGCGACCT GCATTGCGCG GCGGGTCCGC AGGCCTACCT CTTGGGCACT CTGCGGGTGG GCAAGGTCAT GCGGCCCTTG GCGGATAGTG ATCCCGAGAG CGCACAGGCG CTGATCGATG AAGGCATCGC CATCAGCCCC ACCTCCACGC TGGAGGCGGC GCTGCCGATT TTTGACCGGG CAGGGGTGGA GTATATCCCG GTGGTCACTG AAGAAGAGTT CTCAGAAGAG ACCGGAGAGC CACTGATGAC CCTGATCGGC GTGCTCCATC ATGTAGACTC GCTCAAGGCA TACAACAGCG CGCTCGTGGC CATTGCGGCC GAAGAACACC GGTAG
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Protein sequence | MARRESSPLS EYLANTKARL RDARRVLVHR GPSQLQFWLI ALVIGVLAGF AALFFRKGIT ALQGAVYGAE DVDYLHSFAA TLPWYVLLLV PVFGGLIVGI ILHRFTPDGR VRSVADVIEG AALRDGRVEI REGLASACAS FLTLSTGGSS GREGPVVHIA GMISTWVSDR IRADGITGRD LLGCAVAAAV SASFNAPIAG ALFAMEVVLR HFSVNTFAPI VVASVAGTVI NRLEYGDVTE FVLTTPGALQ FYVELPAFLM LGLICGVVAV VLMHSIFLAD RVGTAVQSAL GMPRWLRPTV AGFLLGLVAI WYPHIIGVGY ETTVLALSGS LLLSQAILFT IVKVAAVSIT MGGRMGGGVF SPSLMVGALT GLAFGLIATN FLPDVSGTHT LYAFAGMGAV AAAVLGAPIS TTLIVFELTG DWQIGLAVMV SVSMSTALAS RMVDRSFFLT QLEKRDLHCA AGPQAYLLGT LRVGKVMRPL ADSDPESAQA LIDEGIAISP TSTLEAALPI FDRAGVEYIP VVTEEEFSEE TGEPLMTLIG VLHHVDSLKA YNSALVAIAA EEHR
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