| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0680 |
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| Symbol | |
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| ID | 4077288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 727602 |
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| End bp | 728786 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005977 |
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| Product | HI0933-like protein |
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| Protein accession | YP_612675 |
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| Protein GI | 99080521 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2081] Predicted flavoproteins |
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| TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.192167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCCCCA TGCGGATAAA AACCTTGATT CTCGGCGCCG GCGCGGCTGG CATGATGTGT
GCAGCCCATG CAGGGGGCGA TTGCCTCGTG GTGGACCACG CCAAGTCCCC CGGAGAGAAG
ATCCGCATCT CCGGCGGCGG GCGCTGCAAT TTTACCAATA TGTATGCCGC ACCCGAGAAT
TACATCTCGC AGAACCCGCA TTTCTGTAAA TCTGCGCTGG CCCGCTACAC GCAATGGGAT
TTCATTGACC TCGTGGGCCG TCATGGCATC GCGTGGCATG AAAAAACGCT TGGCCAGCTC
TTTTGCGATG ACTCCGCACG CCAGATCGTC GCGATGCTGG TCAAAGAATT GCGCGACGCC
GGGGCTGACC TGTGGTTGCA GACCTCGGTC GCGGATGTGG TGCATGGCCG TGACGGATAC
ACCGTCCGCC TCGAGCGCGA GGGCAAGCCC GTGACGATCA CGGCTCAGAA CCTCGTGCTG
GCAACCGGTG GCAAATCGAT CCCCAAGATG GGCGCGACGG GTCTTGCCTA TGACATCGCG
GGGCAGTTTG GGCTGCCCGT CCTTGAGACC CGCCCCGGGC TTGTTCCCCT CACCTTTGGC
GAGGGGCGTT TCAAACCTTT GGCCGGGGTC TCGGTGCCCG CACGGCTCTC CAATACTGCG
GCCAGTTTTG ACGAGGCGCT GCTCTTCACC CATCGGGGCC TCTCTGGACC GGCGGTTCTG
CAGATCTCGA GCTATTGGCG CGAAGGAGAG GACATCTTGG TCCACCTGCT GCCGGAACTG
GATCTTTTTT CGGCCCTGCG CGCGCAACGT CAGGAAAGCG GGCGCAAGGA TCTGACAACC
GAACTGGCGC GCCACCTGCC TGCACGGTTG GTGGAGGAGC TGGCGCAGGA CGGCAGCCTC
AGGGGGCGTT TGGCCGATCA GTCCGATGCA GCGCTCGAAG CCCTCTGCGC GCGGCTGCAC
AGTTGGCGAC TGAAGCCCAC CGGCACCGAG GGCTATCGCA CCGCCGAAGT GACGCTGGGC
GGGATCGACA CCGATGCACT GTCGTCGCGC TCGATGGAGG CCAAGGCGCA GCCCGGCCTC
TATGTAATCG GCGAAGCGGT GGACGTGACC GGCTGGCTCG GCGGCTATAA CTTCCAGTGG
GCCTGGGCGT CGGGCCACGC CGCAGGCACC GCCATTCGGG GCTGA
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| Protein sequence | MRPMRIKTLI LGAGAAGMMC AAHAGGDCLV VDHAKSPGEK IRISGGGRCN FTNMYAAPEN
YISQNPHFCK SALARYTQWD FIDLVGRHGI AWHEKTLGQL FCDDSARQIV AMLVKELRDA
GADLWLQTSV ADVVHGRDGY TVRLEREGKP VTITAQNLVL ATGGKSIPKM GATGLAYDIA
GQFGLPVLET RPGLVPLTFG EGRFKPLAGV SVPARLSNTA ASFDEALLFT HRGLSGPAVL
QISSYWREGE DILVHLLPEL DLFSALRAQR QESGRKDLTT ELARHLPARL VEELAQDGSL
RGRLADQSDA ALEALCARLH SWRLKPTGTE GYRTAEVTLG GIDTDALSSR SMEAKAQPGL
YVIGEAVDVT GWLGGYNFQW AWASGHAAGT AIRG
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