| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0678 |
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| Symbol | |
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| ID | 4077286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 724251 |
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| End bp | 726050 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638005975 |
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| Product | GTP-binding protein LepA |
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| Protein accession | YP_612673 |
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| Protein GI | 99080519 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0691872 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGC TCTCGAAAAT CCGCAATTTT TCCATCGTCG CCCATATCGA CCATGGTAAG
TCCACGCTTG CAGACCGCCT CATCCAGTCG ACGGGGACGG TGCAGGATCG TGACATGAAA
GAGCAGTTGC TCGACGCCAT GGACATCGAG CGTGAACGGG GCATCACCAT CAAGGCGAAC
ACCGTCCGCA TCGACTACGA AGCCGATGAC GGGGAACGCT ATGTGCTGAA CCTGATCGAC
ACCCCCGGCC ACGTCGACTT TGCCTATGAG GTGTCGCGGT CCATGCGCGC GGTTGAGGGC
TCTTTGCTCG TTGTCGACTC CACCCAAGGG GTCGAGGCGC AGACCTTGGC GAATGTCTAC
CAGGCGATTG ATGCGGACCA CGAGATCGTT CCGGTTCTGA ACAAGATCGA CTTGCCGGCG
GCCGATTGTG ACCGTGTGGC AGAGCAGATC GAGGACGTGA TCGGCATCGA TGCAACCGAT
GCGATCCGAG TCTCGGCCAA AACCGGCATC GGCATCAAGG ACACGCTTGA GGCCATCGTG
AAACGTCTGC CCGCCCCGAC AGGAGAGCGC AACGCGCCTC TGAAGGCGAT GCTGGTGGAC
AGCTGGTACG ACGCTTATCT GGGCGTGATC GTTCTGGTGC GCATCATGGA CGGGGTCCTG
AAGAAGGGCG ACCAGATCAA GATGATGCAG ACCAACGCGC GGTACGGTGT GGACCGGATC
GGTGTATTCC GCCCTGCGAT GCAGGTGGTG GACGAGCTTG GGCCGGGCGA GATCGGCTTT
ATCACTGCTT CGATCAAACA GGTGCGTGAC ACCAAGGTGG GCGATACCAT CACCCACGAC
AAGAAAGGCG CAGAGACCGC ATTGCCGGGC TTTAAGCCCT CTGTGCCCGT GGTGTTCTGT
GGCCTGTTCC CGGTGGACAG CTCGGAATTC GAGGACCTGC GCGACGCGAT TGAAAAGCTG
GCGCTCAATG ATGCGTCCTT CTCCTACGAG ATGGAAACCT CCGCCGCGCT TGGGTTTGGT
TTCCGTTGCG GCTTCCTTGG GCTTTTGCAC CTTGAGGTAA TCCGGGACCG GATCGAGCGA
GAGTATAATA TCGAGCTGAT CACCACGGCA CCGTCGGTTG TCTATCATAT CTTCATGAAA
GACGGGGAGA TGCTTGAACT GCATAACCCG GCTGACATGC CCGACCTGTC CAAGGTGGAT
CATCTCGAAG AGCCGCGCAT CAAGGCGACC ATCCTGGTGC CGGATGAGTA TCTCGGTGAC
GTGCTCAAGC TGTGTCAGGA CCGCCGCGGC ATTCAGCAGG ACCTGTCCTA TGCGGGCTCG
CGGGCCATGG TGGTCTACGA CCTGCCGCTC AACGAGGTGG TGTTTGACTT CTATGATCGT
CTGAAATCGG TCACGAAAGG CTATGCGTCC TTTGATTACC AGATGATCGG CTATCGCGCG
GACAATCTCG TAAAGATGTC GGTGCTGGTG AATGACGAAC CTGTGGATGC GCTCTCGACC
ATGGTTCATC GCGACCGTGC CGAGCAGCGG GGCCGCGCCA TGTGTGAAAA GCTCAAGGAC
CTGATCCCGC GCCACATGTT CAAGATTCCG ATCCAGGCCG CGATTGGTGG CAAGGTGATC
GCGCGCGAGA CGCTCTCGGC CCTGCGCAAG GATGTGACCG CAAAATGTTA CGGCGGCGAC
GCCACCCGAA AACGCAAGCT CCTTGAAAAG CAAAAAGCCG GTAAGAAGAA GATGCGCCAG
TTCGGCCGGG TTGAAATCCC GCAAGAGGCG TTTATCTCCG CGCTCAAGAT GGACGACTGA
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| Protein sequence | MTELSKIRNF SIVAHIDHGK STLADRLIQS TGTVQDRDMK EQLLDAMDIE RERGITIKAN
TVRIDYEADD GERYVLNLID TPGHVDFAYE VSRSMRAVEG SLLVVDSTQG VEAQTLANVY
QAIDADHEIV PVLNKIDLPA ADCDRVAEQI EDVIGIDATD AIRVSAKTGI GIKDTLEAIV
KRLPAPTGER NAPLKAMLVD SWYDAYLGVI VLVRIMDGVL KKGDQIKMMQ TNARYGVDRI
GVFRPAMQVV DELGPGEIGF ITASIKQVRD TKVGDTITHD KKGAETALPG FKPSVPVVFC
GLFPVDSSEF EDLRDAIEKL ALNDASFSYE METSAALGFG FRCGFLGLLH LEVIRDRIER
EYNIELITTA PSVVYHIFMK DGEMLELHNP ADMPDLSKVD HLEEPRIKAT ILVPDEYLGD
VLKLCQDRRG IQQDLSYAGS RAMVVYDLPL NEVVFDFYDR LKSVTKGYAS FDYQMIGYRA
DNLVKMSVLV NDEPVDALST MVHRDRAEQR GRAMCEKLKD LIPRHMFKIP IQAAIGGKVI
ARETLSALRK DVTAKCYGGD ATRKRKLLEK QKAGKKKMRQ FGRVEIPQEA FISALKMDD
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