Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0651 |
Symbol | |
ID | 4078164 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 696203 |
End bp | 698143 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638005948 |
Product | AsmA |
Protein accession | YP_612646 |
Protein GI | 99080492 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.639423 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCCTGA TCCTCCGTAT TCTTTCCGCC ATCGTGATCA CCATTGCCGT TGGCGTCGCG ATTTTGACCT TTCTGCCCGG CCAAAAGATC GCTGAATTGG CCGCGCAGCA AATCGAGAAG CAGACCGGGC GTCAGGTGGT GTTTGGCGGT GACGTGCGAT TCTCCTTCTG GCCGACGCTG GGTATTCAGG CCGATGACGT CGCCCTTGCC AACGCGGATT GGGCCGGGCC AGAGCCGCTT TTGACGGCGG GGCGGCTCAC GATTGGCGTG GATGCCGCAG ATTTGATCCG CGGCGACATC CGGATCACGG AGCTGACGGC GATTGTGCCC CATCTCAATC TTGAGACCCG CGAAGATGGC ATTGGCAACT GGGTCTTTGA TGCGCCCGCC GTGGGCGAAA CGCCCGCCCA GGTTGAGACC GACGCAGAAG GTGAAGGGAC GTCCGTCGCG ATCGAGGCCA TCACGCTGCG TGGGGCGTCG CTGCGCTATG CGGCCCATGG GCAGGATGTT GTCGAAACCA ACCAAGTGGA CCTGCAACTC GCGTGGCCCG ATCCCAACGG TACGGCAAAC GTTGATCTGA CCCTGCGCCC TGCCGGAAAG CCGCTCCGGA TTGCAGGGGA GGTAGGCAGT TTCAGGCGGT TCTTGCTTGG TGAGGTCGCT TCCCTCGGGG TGACGGTCAC GGCCGAGGCA AGCAAGCTGC GCTTTGATGG GCAGGCGGAT CTGAGCGGGG CGTTTGATGG GCGCATCACC GGGGCAAGCG ACGACACCAG TGCGCTCCTG GTGGCCTTGG GGCAGGCGGC GGTTGATCTT CCCAAAGGTC TTGGGCGCGC AATGACTTTT GCTGCTGACA CGACCTATAC ACCGGACGGG CGGGTGTCGC TGCGCGATCT GAGCCTAGCC CTGGATCACA ACGCGCTGCG CGGGGATGCG GATCTGAACC TTGCGGCGTC TCCGCTCAAG GTGACGGCCG CCTTGGAGGG AGATATGCTG GACCTCAGCG CGCTCGGAGC GCCGACGACA GGCGCCGGGG GCAACACCGC GGAGCCTGCG ACGCAAGGAT GGTCGACCAC GCCGATCGAT GCGTCCATGC TTGCGCTTAT CGAGGGGGAT ATCTCGCTGG ATGTGAAGGG GCTTCAGACG TCCTCGGTGA TATTTGGTCC CAGCCGGATG ACGCTGAGCA TCGAGCGGGC GCGGGCGGTT CTATCTTTCC TGCCGGTACA GGCTTTTGGC GGAACGCTTC AGGGGGAGTT GATTGCGAAC AATCGAAATG GGCTCTCGGT GGCGGGCAAC CTCCAGTTTG CCAATGTCGA GATGCGCGAG GCGCTGGGGC AATTGGCAGG GTATGACAAG CTCAACGGGG AGGCGCTCGG TAATCTGGAG TTCCTCGGCG TCGGCAATTC CATGGACCAG ATCATGCGCT CGCTTGATGG CAAGGGGCGC GTTGAGCTGG GCAAAGGGTT TTTCACCGGG TTTGACTTGC AATCGGTCAT GGACCCGAAC GGCGGCAATG GTGGGACAAC CATCTTTGAA GGTCTGACCG CAAGCTTTGA CATGATTGAT GGGACCTTGC GCAATGACGA TCTGAATGCG GCGCTCAAGG TCCTGAAGGC CGCAGGCGCG GGGCGCGTCG GGCTTGGATC GCAGGATCTG GATTATACGT TTACCCCCAC GGCCTTTGCG AGCGAGACCT CTGCAGGCGT GTCGGTACCG GTGCGGATAC AGGGATCGTG GTTCGACCCC GAGATCAAAC CCGATCTGAG CAAGCTAGTG CAGCCAAAAT TGGATGAGGC CGAAGAAAAG GCAAAACAGG CTGTGCGTGA CAAGCTGAGC GACGAGCTCG GGGTGCCGGT GGAAACTGAG GAAGACCTGA ACGATGCGCT AAAACGCCGG GTCGAAGAAG AGGCGCGCAA GCAACTGCTG AAGTTTCTCG GCAGCGATTG A
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Protein sequence | MRLILRILSA IVITIAVGVA ILTFLPGQKI AELAAQQIEK QTGRQVVFGG DVRFSFWPTL GIQADDVALA NADWAGPEPL LTAGRLTIGV DAADLIRGDI RITELTAIVP HLNLETREDG IGNWVFDAPA VGETPAQVET DAEGEGTSVA IEAITLRGAS LRYAAHGQDV VETNQVDLQL AWPDPNGTAN VDLTLRPAGK PLRIAGEVGS FRRFLLGEVA SLGVTVTAEA SKLRFDGQAD LSGAFDGRIT GASDDTSALL VALGQAAVDL PKGLGRAMTF AADTTYTPDG RVSLRDLSLA LDHNALRGDA DLNLAASPLK VTAALEGDML DLSALGAPTT GAGGNTAEPA TQGWSTTPID ASMLALIEGD ISLDVKGLQT SSVIFGPSRM TLSIERARAV LSFLPVQAFG GTLQGELIAN NRNGLSVAGN LQFANVEMRE ALGQLAGYDK LNGEALGNLE FLGVGNSMDQ IMRSLDGKGR VELGKGFFTG FDLQSVMDPN GGNGGTTIFE GLTASFDMID GTLRNDDLNA ALKVLKAAGA GRVGLGSQDL DYTFTPTAFA SETSAGVSVP VRIQGSWFDP EIKPDLSKLV QPKLDEAEEK AKQAVRDKLS DELGVPVETE EDLNDALKRR VEEEARKQLL KFLGSD
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