| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0635 |
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| Symbol | aspS |
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| ID | 4076122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 677748 |
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| End bp | 679532 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005932 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_612630 |
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| Protein GI | 99080476 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.312658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCAT TTCGCAGCCA TACCTGCGCT GAACTGAACA AATCCCACGT GGGCGAAACC
GTTCGCCTCT CCGGCTGGGT TCACCGGGTC CGCGATCACG GCGGCCTTTT GTTCATCGAC
CTGCGCGACC ACTATGGCGT CACGCAAGTC ATGGCCGACC CCGACAGCCC TGTGTTTGCC
GAGATTGAAA AGGTGCGGTC CGAATGGTGT ATCCGCATCG ATGGTGAAGT GAAGGCACGT
GACGAAAGCC TCGTGAACGC CAAGATCCCG ACCGGCGAGA TTGAGGTTTT CATCCGCGAC
ATCGAAGTTC TGGGCAAATC CGAAGAGCTG CCGCTGATGG TTTTCGGCGA GCAGGAATAC
CCGGAAGAAA CCCGCTTGCG CTATCGCTAC CTCGACCTGC GCCGCGAGAA GATGCAGCGC
AACATGGTGC TGCGCTCCAA CATGATCCGC TCTATCCGCA ATCGGATGTG GGATCAGGGT
TTCAACGAAT ACCAGACACC GATCATCACC GCGTCGAGCC CCGAAGGCGC GCGCGACTTC
CTCGTGCCGT CCCGTCTGCA CCCGGGCAAG TTCTACGCCC TGCCGCAGGC GCCGCAGCAG
TTCAAACAGC TGATGATGGT GTCGGGCTTT GACAAGTATT TCCAGATCGC GCCCTGTTTC
CGCGACGAGG ACCCTCGGGC GGACCGCTCG CCGACCGATT TCTACCAGCT CGATATGGAA
ATGTCCTTTG TCACCCAGCA GGATGTGTTT GACACCATCG CGCCGGTGAT CGCGGGCGTG
TTCGAGGAAT TCGGTCAGGG CCGCAAGGTC GATGCTCCGA ATGAATGGCC GCAAATTTCC
TATAAGGACG CGGCCCTCTG GTATGGCTCC GACAAGCCGG ACCTGCGCAA CCCGATCAAA
ATGCAGGTGG TGTCCGAGCA TTTCCGCGGC TCTGGTTTTG CAATCTTTGC AAAGCTCCTG
GAGCAGGAAG GCACCGAAAT TCGCGCCATT CCCGCACCGA CAGGTGGCTC GCGCAAGTTC
TGTGACCGGA TGAATGCCTT TGCCCAGAAA GAGGGCCTGC CGGGCATGGG CTATATCTTC
TGGCGCGAGG GCGCGGACGG CATGGAAGCC GCTGGACCCT TGGCGAAAAA CATCGGCCCC
GAACGCACCG AAGCGATCCG CCAGCAGCTT GGTCTGGGTG TGGGCGATGC GGCCTTCTTC
CTCGGGGGCA AGCCCAAGAC ATTCGAGGCG GTTGCAGGCC GCGCGCGCAA TGTGATCGGC
GAAGAACTGA ACCTCACCGA CAAGGACCGT TTCGCCTTTG CCTGGATCGT GGACTTCCCG
ATCTATGAAA AGGACGAAGA GACCGGCAAG ATCGACTTTG AGCACAACCC CTTCTCCATG
CCGCAGGGCG GAATGGACGC GTTGAACGGC GATCCACTCG ATGTGCGCGG CAACCAGTAT
GATCTGGCTT GTAACGGTTA CGAGCTGGTC TCGGGCGCGA TCCGGAACCA CAAGCCAGAG
ATCATGTTCA AAGCCTTCGA GATCGCAGGC TACGGCAAGG AAGAGGTCGA AAAGCGCTTT
GGCGGTATGG TCAACGCGTT CCAGTATGGC GCCCCGCCGC ACGGGGGCTG TGCAGCCGGT
ATCGATCGCA TGGTGATGCT TCTGGCGGAT GAGGCCAACA TCCGCGAGGT CATCATGTTC
CCGATGAATC AGCGCGCCGA AGACCTGATG ATGGCCGCAC CCTCCGAGCC GATGTCGGAG
CAGCTGATGG AACTTGGCCT GCGCGTGATC CCGCAGGACG ACTGA
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| Protein sequence | MHAFRSHTCA ELNKSHVGET VRLSGWVHRV RDHGGLLFID LRDHYGVTQV MADPDSPVFA
EIEKVRSEWC IRIDGEVKAR DESLVNAKIP TGEIEVFIRD IEVLGKSEEL PLMVFGEQEY
PEETRLRYRY LDLRREKMQR NMVLRSNMIR SIRNRMWDQG FNEYQTPIIT ASSPEGARDF
LVPSRLHPGK FYALPQAPQQ FKQLMMVSGF DKYFQIAPCF RDEDPRADRS PTDFYQLDME
MSFVTQQDVF DTIAPVIAGV FEEFGQGRKV DAPNEWPQIS YKDAALWYGS DKPDLRNPIK
MQVVSEHFRG SGFAIFAKLL EQEGTEIRAI PAPTGGSRKF CDRMNAFAQK EGLPGMGYIF
WREGADGMEA AGPLAKNIGP ERTEAIRQQL GLGVGDAAFF LGGKPKTFEA VAGRARNVIG
EELNLTDKDR FAFAWIVDFP IYEKDEETGK IDFEHNPFSM PQGGMDALNG DPLDVRGNQY
DLACNGYELV SGAIRNHKPE IMFKAFEIAG YGKEEVEKRF GGMVNAFQYG APPHGGCAAG
IDRMVMLLAD EANIREVIMF PMNQRAEDLM MAAPSEPMSE QLMELGLRVI PQDD
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