| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0613 |
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| Symbol | |
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| ID | 4078126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 652460 |
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| End bp | 654220 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005910 |
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| Product | adenylate/guanylate cyclase |
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| Protein accession | YP_612608 |
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| Protein GI | 99080454 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0360418 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCCGC AAGGTGTTAC AGAGGCGACA TGCGCGCCGC CCCTCCAATG CAAGAAGGAC
AGCTCGCTCT TGGCCCAAGC ACTCTGGCAA GGCAACTGGA TCCACCGCAG CCGGCTGGTC
TCCGGCCTTG TGCTTTTTAC TTTTGCATTC TTTCACTTTC TGAATGTTGC CGCCGGTCTG
GTCTCGCCCG CGCTGATGGA GGCGATGCAG GAGGTGCGCG AACCTTTCAG CAAAAGCCCC
CCCGGTCAGG TGCTTCTGTA CGGGTCGCTT TTGGTGCATG CCGGTCTAGC ACTCTGGCAG
GTGGCGATGC GGCGCACACT GCGGATGAGC TTTGTGCAGG GATTGCAATT GCTTCTTGGG
GTACTGATCC CGCTGCAATT GTTTCAACAT ATTGCGCACA CGAACTACGC CGCCCGCGTG
CAAGGCTATG AGGACGAAAT GTCCTCGGTC GTGGTGATGC TATGGTCAGG GCCGGAAGCG
CTGCACCAGT ATCTCCTGCT GCTGGCGGTA TGGATACATG GCTGCGTCGG CCTTCACATG
TGGCTGCGCC TGACAAGATG GTGGGGGACC CTGACACCCT ATATGATCGG GCTTGCGGTC
TTGATCCCCG CGCTGGCCCT AGCCGGTTTG GTGACTGAAG GGCGCCGCAT GTGGGCGTTC
TTTTCAAACC CTGAGGTCGC GCAACAAATC ATCGAGGATT ACAACTGGCC GGATGCCGCG
GGTTTTGCCC ATCTGGCGAT GGTCTCCGAC TATAGCATCT CGATCTTTTT TGGCTGTCTC
GTGCTCGCCC TGGGCACCTA TGGGGTGAGG CGCCTCATTC GGCGTCGTCG ATCGGTGCGC
ATCACCTACG AGCGTGGTCC CGAGGTGACG GCCGACCGCG GGCTGACCGT GCTGGAAATC
TCGCAAATGA ATGGCATTGC GCACCCTTCG CTTTGTGGCG GCAAAGGGCG CTGCACGACC
TGCCGCGTGG CAATTCTGGC GGGGGGCGAC GATCTCCCCC CACCGACAGC GGCTGAGGCC
CGCAGTTTGC GCGCCATCAA CGCGCCCGAG AACATGCGTC TGGCATGCCA GATCACGCCC
ACCTCGGCTT TGACGGTCAA GCGTCTCTAT ATGGCAAAGG GCCGTCATCA GGTTCACGCA
ACCCAAGGCG AAGAAAAAAC CATCGCGGTG CTGTTTCTCG ACATTCGTGG TTTTACCGCG
CGGTCCGAGG GGCTCTTGCC CTATGATGTT GTGTTCCTGC TCAACCGGTT TTTTGACGCC
ATTGTCCCGC AAATCACACG CGCTGGCGGG GCCGTCGACA AATATATGGG GGATGGGTTG
CTCGCTCTGT TTGAAACCTC GGATGCCACC AGTTCGGCAC AGGCCGCGCT GACAGCGGCA
GCCGACATTG GTTCCGCGCT GGAGCGGTTC AATCGCCTGC TGGTCGCCGA AGGAGAACAG
CCATTGCGCA TCGGCATGGG GGTTCACACC GGAACCGTCG TTCTGGGTGA AATCGGTGCA
GCCGGGCATG CGCCCCGTAC GCTCATTGGT GCCACTGTCA ATGCCGCAAG CCGCCTTGAG
GCCAAGACCA AGGAGCTCGG CGTCGAAATC CTCATTTCGC GCGCAGTCTT CGACACCGCA
ACCCTGCCCC AAGCTGAGAC ACGGTTTCAA ACCTTCGAGC TGCGTGGCGT GGATGCCCCG
GTTGCGGCCC TGCCCCTTGA GCATGCATCA AGGCTGAGTG ACTTGTTGGC AGACACTCCC
TCGGAGAACG CCCTTCGGTA A
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| Protein sequence | MFPQGVTEAT CAPPLQCKKD SSLLAQALWQ GNWIHRSRLV SGLVLFTFAF FHFLNVAAGL
VSPALMEAMQ EVREPFSKSP PGQVLLYGSL LVHAGLALWQ VAMRRTLRMS FVQGLQLLLG
VLIPLQLFQH IAHTNYAARV QGYEDEMSSV VVMLWSGPEA LHQYLLLLAV WIHGCVGLHM
WLRLTRWWGT LTPYMIGLAV LIPALALAGL VTEGRRMWAF FSNPEVAQQI IEDYNWPDAA
GFAHLAMVSD YSISIFFGCL VLALGTYGVR RLIRRRRSVR ITYERGPEVT ADRGLTVLEI
SQMNGIAHPS LCGGKGRCTT CRVAILAGGD DLPPPTAAEA RSLRAINAPE NMRLACQITP
TSALTVKRLY MAKGRHQVHA TQGEEKTIAV LFLDIRGFTA RSEGLLPYDV VFLLNRFFDA
IVPQITRAGG AVDKYMGDGL LALFETSDAT SSAQAALTAA ADIGSALERF NRLLVAEGEQ
PLRIGMGVHT GTVVLGEIGA AGHAPRTLIG ATVNAASRLE AKTKELGVEI LISRAVFDTA
TLPQAETRFQ TFELRGVDAP VAALPLEHAS RLSDLLADTP SENALR
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