| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0605 |
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| Symbol | |
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| ID | 4078643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 645532 |
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| End bp | 646422 |
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| Gene Length | 891 bp |
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| Protein Length | 296 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005902 |
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| Product | phenazine biosynthesis PhzC/PhzF protein |
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| Protein accession | YP_612600 |
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| Protein GI | 99080446 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0384] Predicted epimerase, PhzC/PhzF homolog |
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| TIGRFAM ID | [TIGR00654] phenazine biosynthesis protein PhzF family |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.435654 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGATT TCCAGTTTGA TTGGGTGGAC GCTTTTACGG ATCGTCCCTT TGGCGGCAAT
GGTTGTGCAG TGGTCCATGG GGGCGCGCAT CTGCCCGAGG CGGTGGCCTG CGCCTATGTG
CGCGAAACCT CGCTGGTAGA ATGCACCTTC ACCGGCCCGT CTGAGGTCGC GGACATCAAG
GTGCGCTATT TCCTCGCCAG CCGAGAGATC CCCTTTGCCG GTCACCCAAC CATCGCGACG
GTCGCCGCCA TGCGGGATCG CGGGCTGATC TCGGGCCAGC GCATCACGCT CGAGACAGGT
GCGGGCATCG TTCCAGTCGA TCTCGAAGAC GATCTCATCG TAATGCAGCA GGTCGCGCCC
CAGTTCGGCG TGACCCCGGA TCGAGCACTT GTTGCTGCAG CGATCAGCCT GCCGGAAACA
GCAATCCTCG GTCAGCCGCA GCTCGTGTCT ACGGGGCTGC CGTTTTGTAT TACCGTGCTG
AAAGATCTCG ACAGTCTGCG TGCTGCGCGC CTCGACGCGG TCGCGATGGA GCCACTTGGG
CGCGCCCTTG GTGCCGATGG CAGCGATGTA ATGGAGCCTT TCCTCGTGAC GCTTGATGGG
TTCACCCCAA CAGGCGATAC GTTTTCGCGA CTGCTCATGC TGCCGCCAAG CCCGCCGGAG
GATCCGTTTA CGGGCTCTGC AACGGGCGCT ATGGCGGCTT ATCTTTGGCA TCATGGCTTG
ATGGACAAAG CCGTGTTTGT AGCAGAGCAG GGACACCTGA TGGATCGCCC GGGCGAAGCT
CATGTCGCCC TCGTCGGGGA CCGGTCAGCC CCGAAGGGCA TTCGCGTCGG GGGGCGCGGT
TTTGTTTTGA TGCGTGGAGA GGTCGGCCTG CCAACGAGTT TACAGACCTG A
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| Protein sequence | MQDFQFDWVD AFTDRPFGGN GCAVVHGGAH LPEAVACAYV RETSLVECTF TGPSEVADIK
VRYFLASREI PFAGHPTIAT VAAMRDRGLI SGQRITLETG AGIVPVDLED DLIVMQQVAP
QFGVTPDRAL VAAAISLPET AILGQPQLVS TGLPFCITVL KDLDSLRAAR LDAVAMEPLG
RALGADGSDV MEPFLVTLDG FTPTGDTFSR LLMLPPSPPE DPFTGSATGA MAAYLWHHGL
MDKAVFVAEQ GHLMDRPGEA HVALVGDRSA PKGIRVGGRG FVLMRGEVGL PTSLQT
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