Gene TM1040_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0575 
Symbol 
ID4076140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp612951 
End bp613289 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content56% 
IMG OID638005872 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_612570 
Protein GI99080416 
COG category[C] Energy production and conversion 
COG ID[COG1146] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000552011 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000211898 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGACCTACG TCGTTACGGA CAATTGTATT GCCTGCAAGT ACACCGATTG CGTCGAGGTG 
TGCCCGGTTG ACTGTTTCTA CGAGGGTGAG AACACCTTGG TGATCCATCC CGATGAATGC
ATCGATTGCG GCGTATGTGA GCCGGAATGC CCTGCCGACG CGATTCGTCC GGACACAGAG
CCGGATATGG ACCAGTGGGT GGAATTCAAC CGTAAGTACG CCGAGCTGTG GCCGGTTATC
GTCTCCAAGA AAGACCCGAT GCCGGGTCAT GAGGAGCGCG ATGGCGAAGA GGGCAAGCTC
GAGAAATACT TCTCCGAAGC ACCCGGAGAA GGTGGTTAA
 
Protein sequence
MTYVVTDNCI ACKYTDCVEV CPVDCFYEGE NTLVIHPDEC IDCGVCEPEC PADAIRPDTE 
PDMDQWVEFN RKYAELWPVI VSKKDPMPGH EERDGEEGKL EKYFSEAPGE GG