Gene TM1040_0551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0551 
Symbol 
ID4077902 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp588383 
End bp588934 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content60% 
IMG OID638005848 
ProductL-2,4-diaminobutyric acid acetyltransferase 
Protein accessionYP_612546 
Protein GI99080392 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1247] Sortase and related acyltransferases 
TIGRFAM ID[TIGR02406] L-2,4-diaminobutyric acid acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAAAG ACATCCTGCA GACTGAGACT GATAGCCCCC GAACTTGCCA GCCCCGCCTG 
CGCAAGCCAA ATGCGACGGA CGGGGCCGAT ATCTGGGAGC TGGTCAGGGC CTGCGAGCCG
CTCGATCGAA ACTCCATGTA TGCCAATTTG ATCCAAGCGG ATCACTTCCG CGACACCTGT
GTGGTGGCGG AGCTTGATGG CGACATCGTC GGCTGGATTT CCGGCCACAT AATCCCGGGC
GAGGATGCAT TCTTCGTCTG GCAGGTCGCG GTTGGTGAAG CCGCGCGCGG CATGGGATTG
GGCAAGAAGA TGTTGAAGGC GCTGATCGCG CGTGACGACA TCCGGGATGC CTCCGTGCTG
AAAACAACGA TCACCAAAGA CAATGCGGCT TCTTGGGGCC TCTTCCGCAG CTTCGCCCGC
GACATCGGCG GCGAGCTCAG CGATGCGCCG CATTTTGAGA GAGAGGTCCA TTTCGACGGC
GCGCATGACA CCGAGCACAT GGTGACCATT ACGCTCGACA ATGAGGCAAA GATCCTCAAG
CGCGCGGCCT AA
 
Protein sequence
MPKDILQTET DSPRTCQPRL RKPNATDGAD IWELVRACEP LDRNSMYANL IQADHFRDTC 
VVAELDGDIV GWISGHIIPG EDAFFVWQVA VGEAARGMGL GKKMLKALIA RDDIRDASVL
KTTITKDNAA SWGLFRSFAR DIGGELSDAP HFEREVHFDG AHDTEHMVTI TLDNEAKILK
RAA