| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0531 |
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| Symbol | |
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| ID | 4077178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 559749 |
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| End bp | 562301 |
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| Gene Length | 2553 bp |
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| Protein Length | 850 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638005827 |
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| Product | hypothetical protein |
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| Protein accession | YP_612526 |
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| Protein GI | 99080372 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.744468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.643161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCG TTGCATATAT TACCCGCAAC GCTTCGGGTA CGAACCAGCA TGGGACCTCT
GCAGAAGGTT CCCCCTCCGT CATTCCGACC AATGGCGCGA CGGATATTTC CCTCAATCTC
GATCCCAGCG ACGTACAGAG TTACGCGCGG CGCGGTCGCG ATCTTCACAT TACATTGTTT
GATGGGACCG TTGTCGAGTT GGAGGGGTTC TATGATCCCG TCGCGACCGG GTCCAAAAAC
CTCTTCCTCA GTGACGGGGG CGATTTCATC GAAGTCGTGC TTGAAGACAA GGCCGACGGG
ATGCTGTTTG CCAGCTACGA GCCGATTGAT ATCTCCGGCA AGTGGAGCGC CTACGACGAC
ATGGTCTTCC TTGATGTGGA CCGGATCGAA CCCGTGGTTG CGCCCCTGGC GGCACCGCTG
CTTGGCGGTC TCGGCGGGCT CGGCGCAGCA GCGGCAGGCG CGGCGGTTCT TGTCGGCGGC
GGTGGCGGCG GTGGTGGAGA CGGAGATGGC GCAATCGTGC CAACCGTCGA CGACGCCGAT
GGCACCTATG ATGTTCCTGA GGGCGACCCT GACGGGGTGA CCATCACCGG CACCGGCGAG
GCAGGCTCTA CGGTAGAAGT CGATATTGGC GGTGTCACCG GCACCACAAC AGTGGGCGAG
GATGGCACCT GGTCGGTGGA CTTCCCAACT TCGGATCTAC CGGGGGACGG CGTCTATGAA
ACTGTCGTGG ACGTGGTTGC GCCAGACGGC ACCACCTACG ACGATCTTGA TGGCCCCACC
ATCGACATCG ATACCGAAGC GCCGACTGTG ATCGTCACCG AAGGCACCAA ATCCGTGAAT
GACATCGTCA ATGGCGACGA ACAGGAAAGC GGGACGATCA TCAGCGGTAC CGGTGAGGCG
GGCGCAACGG TCACACTTGT GATCGAGGGC CACAGCCAGA CCACAACCGT CGATGAGAAT
GGCAACTGGA CGGTGACGTT CAGCTCCGAT GAAATCGATA CCGGCGAGTA CGAAACAGAC
ATCGAGATCA CGACCACCGA TCCGCACGGC AACTCCACCG TGAGCAGCGA TGTGCTGGTA
GTGGACACCG AAACAACGGT GGCAATCGAC ACGGGTCTTG CGGGGGGCGA TGATCTGATC
AACGCCGCCG AGGCCGCAGC CGCCGCGGGT GTTGCGATCA CCGGCACTGC AGAAGCAGGC
GCCGCCGTCG AGGTGGTGGT CGAGGGGGTA ACCCGCACGA CCACCGCCGA CAGCAACGGC
ACATGGTCCG TCATCTATGA GGCGGGCACC TTGCCCAGTG GCACCTATGA CGCTGATATT
TCGGTCACAT CGACCGATAC TGCAGGCAAC AGCGCCACTG CCGACTCGAC CATTGCGGTC
GATACCGAGG CTGGTTTTGT TCAACTGAGC GATGATCCCA TCGAAACCGA TGATGTGATC
AACGAAGACG AGCGCGCCGA TGGCGTGACC ATCACCGGCA CCGCAACGCC CGGCGAGACA
GTGACCGTCC AGCTTGGAAC GGCGCAGGGC ACGGTGGTTG CGGATTCCAA CGGTGATTGG
TCCTATGATT TTGCCGCCAG CGAAATCCCC GAAGGCACCG GCGATCTCGA CATCTCGGCG
ACGATTCAGG ACAGCGCAGG CAATACTGCA AGCGATACCG ACACCGTGGC CTATGATACC
GAAGTGACCA ACTACACCTC GGCAGATCAG AACGATACCG TGGGTGTGAA CCTTCAGCAG
ATGCAGCAGG GCTTCACCTT GCAAGGCACC GTTGAAGAGG GATCCAGTGT CTCGGTTGAG
ATCAACGGCA CGACCCATGA CGCCGTGGTC GACAGCAGCG GCAACTGGAG CCTGACCGTA
GATGGCGATG ACATCGGCAG TTTCTCGCAG GGCGGACTGG TCGCGACCGT GACCGCGACC
GATCCGGCGG GCAACGTCGA CACACTCATG CAGCCGATCG ACATCGATAC GCTCTATGAA
ACGCCAGAGT TTGCAGGCAC CACGACAATC GCGGGCCAAA TCCAGAGTAT CTTCCTCGAT
GAATCCGATG ATGCCCTGAC GATGTATTCG CTGGACAGCA GCGGCAATGC AACGCAACTG
GACGCGACCG AGACGTCCTC GGGGATTTCG GGTGTTGATA AACTCGACCT TGACACTCCG
ATCTCGGATG GCGCCAACCT GATCGTGCAA AGCACGGATG ATGCCGGCAA CAAATCCTCG
ACCCTCGTGA TCGACCAGGA GAACCCTACA TCGAGCCTGC TCTCCGGACT CGATGGGTTC
AACATCGATG CCATCGACCT TGTGTTCGAA GATGGCACCG ACGGTGCAAA CCTTGTGCTC
ACCGAGGCGC TGATCAAGGA GATGTCGGAC AACTCCGACA CCTTGACCAT CCGCGCGGAT
GAGCTGGCGA ATGTGACCCA TGAGGTCACG CTGACAGGCG CGACGGAGAT CACCTCTACC
GTGAGCGGCT ACAGCGCCTA TTCGATCGGC GATGCCACCG TGTTGATCGA AGAAGACGCC
GGCATCAGCC TGAACGGCAC ACCGGTCATC TAA
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| Protein sequence | MSTVAYITRN ASGTNQHGTS AEGSPSVIPT NGATDISLNL DPSDVQSYAR RGRDLHITLF
DGTVVELEGF YDPVATGSKN LFLSDGGDFI EVVLEDKADG MLFASYEPID ISGKWSAYDD
MVFLDVDRIE PVVAPLAAPL LGGLGGLGAA AAGAAVLVGG GGGGGGDGDG AIVPTVDDAD
GTYDVPEGDP DGVTITGTGE AGSTVEVDIG GVTGTTTVGE DGTWSVDFPT SDLPGDGVYE
TVVDVVAPDG TTYDDLDGPT IDIDTEAPTV IVTEGTKSVN DIVNGDEQES GTIISGTGEA
GATVTLVIEG HSQTTTVDEN GNWTVTFSSD EIDTGEYETD IEITTTDPHG NSTVSSDVLV
VDTETTVAID TGLAGGDDLI NAAEAAAAAG VAITGTAEAG AAVEVVVEGV TRTTTADSNG
TWSVIYEAGT LPSGTYDADI SVTSTDTAGN SATADSTIAV DTEAGFVQLS DDPIETDDVI
NEDERADGVT ITGTATPGET VTVQLGTAQG TVVADSNGDW SYDFAASEIP EGTGDLDISA
TIQDSAGNTA SDTDTVAYDT EVTNYTSADQ NDTVGVNLQQ MQQGFTLQGT VEEGSSVSVE
INGTTHDAVV DSSGNWSLTV DGDDIGSFSQ GGLVATVTAT DPAGNVDTLM QPIDIDTLYE
TPEFAGTTTI AGQIQSIFLD ESDDALTMYS LDSSGNATQL DATETSSGIS GVDKLDLDTP
ISDGANLIVQ STDDAGNKSS TLVIDQENPT SSLLSGLDGF NIDAIDLVFE DGTDGANLVL
TEALIKEMSD NSDTLTIRAD ELANVTHEVT LTGATEITST VSGYSAYSIG DATVLIEEDA
GISLNGTPVI
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