| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0518 |
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| Symbol | nrdF |
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| ID | 4077224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 544203 |
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| End bp | 545219 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638005814 |
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| Product | ribonucleotide-diphosphate reductase subunit beta |
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| Protein accession | YP_612513 |
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| Protein GI | 99080359 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0208] Ribonucleotide reductase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.187407 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.381518 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGGGC CTTGCCCCCA AGCTGCTGAG ATCGAGTGTA TGAAAGATAT GACCCAAGCC
CGCGCTGTCC CCAAAGCGAT CAACTGGAAC CGGCTTCAGG ACGACAAGGA TCTCGAGATC
TGGAACCGGT TGACCGTAAA CTTCTGGTTG CCTGAAAAGG TGCCGCTGTC CAATGACATC
CAGTCCTGGT CCCAGCTCAC ACCGGACGAG CAGACCCTGA CCATTCGGGT GTTCACTGGC
CTCACGCTTC TGGATACAAT CCAGAATGCC GTGGGCGCGC CGACCCTGAT GCAGGACGCG
ATCACCCCGC ATGAAGAGGC TGTGCTGAGC AACATCTCCT TCATGGAGGC GGTGCATGCG
CGGTCTTATT CCTCGGTGTT TTCGACCCTC TGTCAGACCA CCGAGGTGGA TGAAGCCTTC
CGCTGGTCGG CCGAAAACGA GCATCTGCAG GCCAAATCGC GTCTGATCCT CGGCGAATAT
GACGCCACCG CCTCGCCGCT GCGCAAAAAG ATCGCCAGCG TGTTCCTTGA GAGCTTCCTG
TTCTATTCGG GCTTCTATCT GCCGATGCAC TGGTCGAGCC GCGCGCGCCT GACCAACACC
GCAGACCTCA TTCGTCTGAT CATTCGCGAC GAGGCCATTC ACGGCTATTA CATCGGCTAC
AAGTTCCAGC GCGGCCTGGA GCGCGCCAGC GAGGCTGAGC GCAAGGAGCT GAAGGATTTT
GCCTTTGGTC TGCTGTTTGA CCTCTATGAT ATCGAGGCGC GCTACACAGA GCAGCTCTAT
GATGGGCTTG GGCTCACAGA GGATGTGAAG AACTTCCTGC ACTATAACGC CAACAAGGCG
CTGCAGAACC TTGGCTTTGA GGCCCTGTTC CCGGAAGAGA CCTGCCGCGT CAATCCGGCA
ATCATGGCCG CACTGTCGCC GGGGTCGGAT GAAAACCACG ACTTCTTTTC CGGGTCCGGC
TCAAGCTATG TGATCGGCAA GGCAGTTGCG ACCGAGGATG ACGACTGGGA TTTCTGA
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| Protein sequence | MKGPCPQAAE IECMKDMTQA RAVPKAINWN RLQDDKDLEI WNRLTVNFWL PEKVPLSNDI
QSWSQLTPDE QTLTIRVFTG LTLLDTIQNA VGAPTLMQDA ITPHEEAVLS NISFMEAVHA
RSYSSVFSTL CQTTEVDEAF RWSAENEHLQ AKSRLILGEY DATASPLRKK IASVFLESFL
FYSGFYLPMH WSSRARLTNT ADLIRLIIRD EAIHGYYIGY KFQRGLERAS EAERKELKDF
AFGLLFDLYD IEARYTEQLY DGLGLTEDVK NFLHYNANKA LQNLGFEALF PEETCRVNPA
IMAALSPGSD ENHDFFSGSG SSYVIGKAVA TEDDDWDF
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