| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0421 |
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| Symbol | |
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| ID | 4076181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 431975 |
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| End bp | 432754 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638005716 |
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| Product | mannosyl-3-phosphoglycerate phosphatase |
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| Protein accession | YP_612416 |
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| Protein GI | 99080262 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3769] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR01486] mannosyl-3-phosphoglycerate phosphatase family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00171889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.264679 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGGC TGCTTGTTTT TAGTGATCTT GATGGCACCT TGCTGGATCA CACGACCTAC
AGCCATGCCG CCGCTCAACC GGCCTTGTCC GCGCTGCGCA GCCGCGATGC AGTGTTGATC
CTGGCAAGCT CCAAGACCGC GGTCGAAATG CTGCCGCTGC ATCAGGAACT CGGGCTGGGA
GACGCCCCAA TGATCGTCGA GAACGGATCC GCCTGTCAGC GCCCGACAGA GATCGACAGT
GACCCGGCCA CCTACAACAA ACTGCGCAGG CTTCTCACGC GGCTCGAGAT GCCCTTTGAA
GGCTTTGGCG ATATGTCCAC GCAAAAGGTT GCCGCCCTCA CGGGCCTCAG CGATGAGGGC
GCAGTGCGCG CCAAGACGCG CCAGTTCAGC GAACCCGGCA TCTGGCATGG CACCCCTGCT
CAGAAAGACG CGTTCCTTGC CGCACTGGCC CGCGAAGGGG TCACCGCGCG CCAAGGGGGG
CGGTTCCTCA CGCTCTCTTA TGGCGCCACC AAGGCACAGC AGATGCAAAA GATCCGCCAG
CAACACGCCC CCTGCTTCAC CGTCGCCCTT GGCGATGCCC CCAATGACGC GGAAATGATC
GCCACCGCCG ATATTGGCGT CATTGTACGC AACGATCATG GTCCGGATAT GCCCGCGATC
CCGCCTGAGC ACCGGATCAT GCACACGCAA CAGGAGGGTC CAAAAGGCTG GAACGCGGCC
ATGCTGCAGA TCCTCAGCGA ATGGGACCAC GACCACAAAG GAGCCGCAGC GCATGGCTGA
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| Protein sequence | MPRLLVFSDL DGTLLDHTTY SHAAAQPALS ALRSRDAVLI LASSKTAVEM LPLHQELGLG
DAPMIVENGS ACQRPTEIDS DPATYNKLRR LLTRLEMPFE GFGDMSTQKV AALTGLSDEG
AVRAKTRQFS EPGIWHGTPA QKDAFLAALA REGVTARQGG RFLTLSYGAT KAQQMQKIRQ
QHAPCFTVAL GDAPNDAEMI ATADIGVIVR NDHGPDMPAI PPEHRIMHTQ QEGPKGWNAA
MLQILSEWDH DHKGAAAHG
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