| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0352 |
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| Symbol | |
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| ID | 4076053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 357890 |
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| End bp | 358804 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638005647 |
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| Product | TonB-like |
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| Protein accession | YP_612347 |
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| Protein GI | 99080193 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGCGC GTTCGCCTTT GATTGCCTGT GTATCGCTCT TTTGTGCGCT GGCTGCCCAT
GCGGCTCTCC TGGTGGATCT CGAAGAGACC GCTGTGGAAA TCGAAGGGGG GGACACCCAA
GCGCCCGCAG CGCTGGGCAG CAGTTTTGCG GACCTTGTTC AGGGCACTGC CACAACTGTC
GAGGCTGATG CCACGCGCCA CACCACGCCG GTTGATCCTG TTCCCCCCGC GCCGACAACG
CAGGTGAGCG CCACACCAAT CGCGCCGGTT TCCACGCCCG CTTCTGCGCC GCGCTCTGCT
GCGGTCTCGG CGCCTGTGAT GCCTGCTGTG CCCCCCGTGA CGGAGGCTTC GCCCTCGCCG
ATTGCTGCGG CGGTGGCTCC TGTTGAGGCC CCAGCCCGCG AGGTTCAGCC CGACCAGGCC
GAGGCTCTGG ACACCGCTTC AGAGCTGGCA CCTCAAGAGA GCCCGCGCCC GCTGCGCCGC
CCCGAAGCTG CGCCACAGGC ACGCGACAAG GCGGAAACGC AAGCCCCGGC AGCGCCTGCG
CCGCGCGGCA ACAGCACCGT CAACGCCCGC GCGGGCAGCG AGACGGGCGC AGAACAACAG
CGCGCGAGCC AAGCCGCTAG CACCCGGCCT GCAGCGGGCA GTGGCGCGGG GAATGCGGCG
GCGTCCAATT ATCCGGGGCA GGTGATGCGC AAGATTTCCC GCGTGCGCAA ACCCCGAACC
TCGGTGCGGG GGGTGGCGCA TGTGTCCTTT GTGATCGGCA GCGGTGGACA GTTGGCGTCG
GTGCGCATTC GCAAGAGCTC CGGCTCGACA GAGCTCGATC AACTGGCGCT GCAGCAGATC
CGCAGAGCCG CGCCGTTCCC GCCGCCACCC GTGGGCGCGC GGACGCAATA CTCTATTGCG
ATCAAAGGCC GTTAG
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| Protein sequence | MIARSPLIAC VSLFCALAAH AALLVDLEET AVEIEGGDTQ APAALGSSFA DLVQGTATTV
EADATRHTTP VDPVPPAPTT QVSATPIAPV STPASAPRSA AVSAPVMPAV PPVTEASPSP
IAAAVAPVEA PAREVQPDQA EALDTASELA PQESPRPLRR PEAAPQARDK AETQAPAAPA
PRGNSTVNAR AGSETGAEQQ RASQAASTRP AAGSGAGNAA ASNYPGQVMR KISRVRKPRT
SVRGVAHVSF VIGSGGQLAS VRIRKSSGST ELDQLALQQI RRAAPFPPPP VGARTQYSIA
IKGR
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