| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0323 |
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| Symbol | |
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| ID | 4076219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 327846 |
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| End bp | 328961 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638005618 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_612318 |
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| Protein GI | 99080164 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTAA ATATTATCAC CACCCGCCGG CGTCTGATCA AGGGGGGGAT CGCAGCAGCG
GCCACCCTTG CGGCCCCGTC CGTCCTGCGT GCCCAAGGGC GTCGCGATCT GTCGATGCTG
ACATGGGCCG GCCATGCGGA CCCGGATGTG ATCGGCGCGT TTGAAGAGGC GCATAACGTG
CGCATCCGCG CCAAGGAATA TGTCGGCGGC GATCAGATGC TGGCGCAGAT CGCGCAGTCC
CCGGCGGGCA CTTATGATGT GATCCTGTCG GATGCGGAAT ATGTGGTGCA GCTGCAGCAA
GCCGGGTTCA TCGACCCGCT CTCGCCCGAG GATTATCCGT TTGACGACTT TTTCCCCGAG
TTCCAGAATT TCCGTGGGCA TTGGTTCGAC GGCCAGCCCT ACGCGGTGTT TCTGAGGTTC
GGCTTTCTGG GCCTGTCGCA TCATCGCGGC GCCATGAGCG AGGCGGAGGC GCGCAGCTAT
CGTAGCATGT GGGAGACCCG CCACGAGGGG CGGATCGGCC ATTTTGACTG GCATCTGCCC
AACCTGGGGG CCCTGAGCCT CATGAATGGC AACGCGGCGC CCTTTGATCT CGGTGCGGGA
GATTGGGCGG TGCTCACAGA GACGATGATG TCGCTGCGCC CGCAGGTGCG CGGGTTCTAT
GATTATGGCG GCATGCTGTC GGCGCTGCGG TCCGGAGAGG TTACCGCGAT CCCCGGCATT
GGTGACTGGA TCACGGGCGT CCTTGCCCGA GATGGTGCCG ATGTCACCAC GACTATCCCC
GAGGAAGGGG GACTGCAGTG GACCGAGTCG CTGTCGATTG GCACCCGCTC CCGGAACCCG
GATCTGGCGC GTCAGTTCAT CCAGTACATG CTCTCGCCCG ACGGGCAGGT CAAAACCGCG
ACGCTCAAGG CCTATCCGGC GATGATCCCG ACGCGGTCGG GCTGGGCGCG GTTGAACGCA
GAGCAACCGG GCGAGGCCAA ACGTCAGAAC ATGGTGCTGA ACGGCCCCAA TGCGCTGGAT
GAAATCCGCG CCGGGCGGAT CCGTCTGCGC GAGCTTCCGG TACAGCAATC GCTGGAAACC
TGGAACGACG CCTGGACCCG GTACAAGAAC GCCTGA
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| Protein sequence | MTLNIITTRR RLIKGGIAAA ATLAAPSVLR AQGRRDLSML TWAGHADPDV IGAFEEAHNV
RIRAKEYVGG DQMLAQIAQS PAGTYDVILS DAEYVVQLQQ AGFIDPLSPE DYPFDDFFPE
FQNFRGHWFD GQPYAVFLRF GFLGLSHHRG AMSEAEARSY RSMWETRHEG RIGHFDWHLP
NLGALSLMNG NAAPFDLGAG DWAVLTETMM SLRPQVRGFY DYGGMLSALR SGEVTAIPGI
GDWITGVLAR DGADVTTTIP EEGGLQWTES LSIGTRSRNP DLARQFIQYM LSPDGQVKTA
TLKAYPAMIP TRSGWARLNA EQPGEAKRQN MVLNGPNALD EIRAGRIRLR ELPVQQSLET
WNDAWTRYKN A
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