| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0260 |
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| Symbol | |
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| ID | 4077668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 273804 |
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| End bp | 274844 |
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| Gene Length | 1041 bp |
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| Protein Length | 346 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005554 |
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| Product | succinylglutamate desuccinylase/aspartoacylase |
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| Protein accession | YP_612255 |
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| Protein GI | 99080101 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3608] Predicted deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.982934 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCGGC GTTCCCCTTT TGAAATTGGT GGTTTCCATA TTCCGCCCGG CACCCGGCGC
ACCGTTGATC TGCCGGTGAG CGTGCTGTCG GATCACACAC CGGTCAATAT GTCGGCGCAT
GTGATCCACG GGTCCGAGGA TGGCCCGACG CTCTTTGTGT CTGCGGCTAT CCACGGCGAT
GAGGTGATCG GAGTGGAGAT CGCCCGCCGC CTGTTGCGCA GCCGTCAGTT TGCGCGCCTG
CGGGGCACCC TGATCGTGGT GCCCATCGTC AATACCTTCG GGTTTCTCAA TCATTCCCGC
TATTTGCCGG ATCGACGCGA CCTCAATCGC TGCTTTCCCG GCAGCGAGGG AGGCTCGCTC
GCCAGCCGCC TCGCGCATCT TTTTATGACA GAGATCGTGG CGCGCTCGGA TCTGGGGATT
GACCTGCACT CCGCCGCGAT CCACCGCACC AACCTGCCGC AGATCCGTGT CTCACCCAAG
GCTCAGGATA CGCTTGCCTA CGCCGATGCC TTTGGCGCGC CGGTGGTGAT CCGCTCGGGG
CTGCGGGATG GCTCTCTGCG CAAAGAGGCG CAAAAGGCCG GGGTCGATAT TCTGCTCTAC
GAAGCGGGGG AGGGGTTGCG GTTTGACGAG CAATCCGCCC GTGTTGGTGT CGCCGGGATT
TTGCGCGTGA TGCATGCGCT CGACATGATC CCCGAGGATG GCGTGCCACT GGCCGAAGGT
GTGCCGGTTC GCGCCGCGGA CTCGGCGTGG GAACGTGCAC CCGCCGGCGG ATTGCTCCGT
GCCTATAAAA CCACTGGCGA GATGGTCGAG GCCGGGGATG TGCTCGGGAT CGTTGCCGAC
CCCTTTGGCG AAGAGGAAAT GGAACTCACC GCAAGCCAGA CGGGTCTTAT CATCGGGCGC
GCCAATATGC CCATTGTGAA CGAGGGTGAC GCGCTGTTTC ACATCGCCAG CGTGAATTCC
GCCACCGCCG AACAACAGAT CGAAACGCTC AACGCGCAGC TTGATGGCGC GGCGATGTTT
GACGAGGATG AGATCATCTA G
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| Protein sequence | MARRSPFEIG GFHIPPGTRR TVDLPVSVLS DHTPVNMSAH VIHGSEDGPT LFVSAAIHGD
EVIGVEIARR LLRSRQFARL RGTLIVVPIV NTFGFLNHSR YLPDRRDLNR CFPGSEGGSL
ASRLAHLFMT EIVARSDLGI DLHSAAIHRT NLPQIRVSPK AQDTLAYADA FGAPVVIRSG
LRDGSLRKEA QKAGVDILLY EAGEGLRFDE QSARVGVAGI LRVMHALDMI PEDGVPLAEG
VPVRAADSAW ERAPAGGLLR AYKTTGEMVE AGDVLGIVAD PFGEEEMELT ASQTGLIIGR
ANMPIVNEGD ALFHIASVNS ATAEQQIETL NAQLDGAAMF DEDEII
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