| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0248 |
|---|
| Symbol | rplW |
|---|
| ID | 4076008 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 266610 |
|---|
| End bp | 266906 |
|---|
| Gene Length | 297 bp |
|---|
| Protein Length | 98 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 638005542 |
|---|
| Product | 50S ribosomal protein L23 |
|---|
| Protein accession | YP_612243 |
|---|
| Protein GI | 99080089 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0089] Ribosomal protein L23 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.529844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.684158 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGA AGGCAGAACA CTACGACGTG ATCCGCAAGC CGATCATCAC CGAGAAATCC
ACCATGGCGT CCGAAAACGG CGCAGTGGTG TTCGAGGTGG CAATCGACTC CAACAAACCG
CAGATCAAAG AAGCTGTTGA GGCTCTCTTT GGTGTGAAGG TCAAAGCGGT CAACACCACC
GTCACCAAGG GTAAGGTCAA GCGTTTCCGC GGCCAGCTGG GCAAGCGGAA AGACGTGAAA
AAAGCCTACG TCACCCTGGA AGAAGGCAAC ACCATCGACG TGTCCACCGG ACTCTGA
|
|---|
| Protein sequence | MSAKAEHYDV IRKPIITEKS TMASENGAVV FEVAIDSNKP QIKEAVEALF GVKVKAVNTT
VTKGKVKRFR GQLGKRKDVK KAYVTLEEGN TIDVSTGL
|
|---|
| |