| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0237 |
|---|
| Symbol | |
|---|
| ID | 4075997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ruegeria sp. TM1040 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008044 |
|---|
| Strand | + |
|---|
| Start bp | 257154 |
|---|
| End bp | 257993 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638005531 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_612232 |
|---|
| Protein GI | 99080078 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGGGA GCATGGCGTT CTTCACCTTT AACGATACAC TGGTCAAACT GGTGGGGGAG
ACGGTTCCGC TCTGGCAGAT CGTAACCGTG CGCGGCGTTC TGGCGAGCCT CTTGCTGTTG
GGGCTGGCCC GGGCGATGGG CGCGTTGCGG TTTGATTTCA GCCGTCGGGA CTGGGGGCTG
GTGCTGGCGC GCTGCGCCAC CGAGATGGGC GCGACCTATT TCTTTCTGTC GGCACTTTTG
CAGTTGCCGC TCGCCAATGT CACCGCGGTG CTACAAATGC TGCCGCTGAC GGTGACACTG
TGCGCGGCGT TGTTTCTGGG CGAGGCTGTC GGCTGGAAGC GTAGTCTTGC GATTGCGGTT
GGGTTTGTCG GGATGTTGCT GATCGTGCGG CCGGGCGGTG CCGATTTTGG ACCGGCCACG
GCCTATGCGG TGCTGGCGGT TGGGGTCTTG ACGCTCCGCG ATCTTGTGAC CCGGCAGATG
TCAGCCGCCG TGCCGTCCCT GACGGTGACG TTCCTGTCGG CTTTTGCGGT GATGCTCTTT
GGTCTCGGGC TCGGGATCGG CGAGAGCTGG CAGCCAATGG GGCTGCGCGA ATGGGGGCTT
CTCGCTGGCA CCTCGGTGCT GATCCTGCTC GCCTATCTTT TTGCCGTAAT GACGATCCGC
GTGGGCGAAG TTTCGGCGGT GGCGCCGCTG CGCTATACCG GGCTTGTCTG GGCTCTGCTG
TTGGGCTGGG CGGTCTTTGG CGAATTCCCG TCCGGTCTCA CGCTCCTTGG CGCGGTCATC
GTGGTGCTGG CCGGGCTGTT CACGCTCCTA CGGGAACGTC AGGTGGCAGA AAACACCTGA
|
|---|
| Protein sequence | MLGSMAFFTF NDTLVKLVGE TVPLWQIVTV RGVLASLLLL GLARAMGALR FDFSRRDWGL
VLARCATEMG ATYFFLSALL QLPLANVTAV LQMLPLTVTL CAALFLGEAV GWKRSLAIAV
GFVGMLLIVR PGGADFGPAT AYAVLAVGVL TLRDLVTRQM SAAVPSLTVT FLSAFAVMLF
GLGLGIGESW QPMGLREWGL LAGTSVLILL AYLFAVMTIR VGEVSAVAPL RYTGLVWALL
LGWAVFGEFP SGLTLLGAVI VVLAGLFTLL RERQVAENT
|
|---|
| |