| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0195 |
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| Symbol | trmB |
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| ID | 4078427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | + |
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| Start bp | 213570 |
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| End bp | 214337 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638005489 |
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| Product | tRNA (guanine-N(7)-)-methyltransferase |
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| Protein accession | YP_612190 |
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| Protein GI | 99080036 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0220] Predicted S-adenosylmethionine-dependent methyltransferase |
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| TIGRFAM ID | [TIGR00091] tRNA (guanine-N(7)-)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGACT CTGACGCTAG CCGCCCTTCC GCCATCGCCA GCGATGGCCC TGATGCTGCT
GGCAAGCACG CGTCAGGTGC CCCGTGGCGG AATTTCTACG GTCGCTTCAA AGGCAAGACG
CTGAAACCAA ATCAGGTGCG CGATCTTGAT GAAATGCTGC CCGAGCTCAG CCCCGGTGCG
GTTGGGTGGG ACGAGAACCC CGAGCGAGAA CCGCTGGATC TTGAAGCGCA GTTTCAGGGG
CGTGATGTCT GGCTCGAAGT GGGCTTTGGC GGTGGGGAGC ATCTGGTGCA TCAGGCCGAG
AGCAATCCTG ATGTTGGGAT CATCGGGGCG GAGCCCTATG TGAACGGTGT CGCGATGCTT
CTTGGCAAGC TGCGCAAGTC GTCAGCGGAA AACGTGCGCG TGCACGCAGG CGATGCCCGC
GATCTGATGG ATGTTTTGCC CGCACAAAGT CTTTCTCGTG CATTCTTGCT CTATCCCGAC
CCGTGGCCCA AGGCGCGCCA TCATCGGCGT CGTTTTGTAA CGCAAGAGCA TCTGGAGCCC
CTCGCGCGCG TCCTGAAACC GGGGGCGATT TTTCGCGTGG CTACCGATAT TCCGGACTAT
GTGCGCCAGA CCCTTGAAGA GGTGCCAAAG GCGGGCTTCA AGTGGCTTGC CGAAGGCCCC
GAGGATTGGC GAAAGCCTTG GGGTGACTGG ATCTCTACCC GATATGAGCA AAAGGCGCTG
CGCGAGGGGC GCACGCCGCA TTACCTGACG TTCCAGCGTC AGGACTGA
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| Protein sequence | MSDSDASRPS AIASDGPDAA GKHASGAPWR NFYGRFKGKT LKPNQVRDLD EMLPELSPGA
VGWDENPERE PLDLEAQFQG RDVWLEVGFG GGEHLVHQAE SNPDVGIIGA EPYVNGVAML
LGKLRKSSAE NVRVHAGDAR DLMDVLPAQS LSRAFLLYPD PWPKARHHRR RFVTQEHLEP
LARVLKPGAI FRVATDIPDY VRQTLEEVPK AGFKWLAEGP EDWRKPWGDW ISTRYEQKAL
REGRTPHYLT FQRQD
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