| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | TM1040_0169 |
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| Symbol | |
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| ID | 4078777 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ruegeria sp. TM1040 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008044 |
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| Strand | - |
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| Start bp | 185822 |
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| End bp | 187720 |
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| Gene Length | 1899 bp |
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| Protein Length | 632 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638005463 |
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| Product | 5'-nucleotidase-like |
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| Protein accession | YP_612164 |
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| Protein GI | 99080010 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | [TIGR01390] 2',3'-cyclic-nucleotide 2'-phosphodiesterase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCAAG ACGATCAAGA TGCCACGGGA ACGCAAGAAG AGGCGGGCGA CCAACCTGGC
GTGACGGGGC GGTTGCGCGT GCTTGCGACA TCTGATGTCC ACAGTCACCT TCTCGGCTTT
GATTATTACG CCGATCAAGA GCACCCCGGC ATCGGCCTCA GCCGCACGGC TCAGTTGATC
GCAGAGGCCC GGAAAGAGGC AGCCGAAGCT GGTGATATTG CTGTACTCTT GGACAATGGC
GACTGGCTCC AAGGTTCGCC GCTTGCAGAA CCGGCTCTGG CAACGGACAG CGCCTTGGCG
CCTGCTATCC ATGCATTTGA GGTCCTCGGG TATGATGCCG TCGGCCTCGG CAATCACGAG
TTCAACTACG GCCTATCCGC CTTGTCCCGG GTTCTCTCAG CGCTCCCCTG CCCTGCGGTG
AGCAGCAACA TCACACCGCT TTCAGCAGAT GACACCTTGC CAGTTCACAA ACATCTGATC
CTGACGCGGC ACTTTCGAAG GGCGACAGGT GGCCAGGATG GTGTGGCGGA GGTCAAGATT
GGCCTGCTGT CGGTGCTGCC CCCTCAAACC ATGCTCTGGG ACGCGGACCA TCTGGCCGGA
CGCTTGCATG TGGATGACAT GCTGCGCAGC GCAAAGGCTG CGATTTCAGA CCTGCGGGCG
TCCGGTGCGG ATGTGGTGAT TGCCCTCGCC CACACAGGAG AAGGCGATGA CACTGCGCGG
GACGGAATGG AAAACGCGCT TCGCCCCCTG TCGCGTCTGC CCGGTCTCGA CGCAGCCATC
GGAGGGCATA CGCATTTGTT GCTCCCACCG CCCGACGGCT CGGGACGTGA CTGGGAGATT
CCGGTCGTCA TGCCCGGGTC CGGCGGGTCT CATCTCGGGG TGATAGATCT CGGCCTGCGT
CAGACGCCAC AGGGCTGGCG CGTTGAAGGC GGCAGCGCGG CGCTACGCGC CGTAGCGCAT
CAAACCCGCG ACGGTCTGCG CCCGGTTGTT TCTGAGGCAC CAGATCTCGT TCTGGCGCTA
CGGGATGTCC ACGAACAGAC GCGTGCCGAG ATGGCGGCAA AAGTCGGCAC ATTGTCCGAG
GCACATCATT CCTATTTCAC CTATTTTGCT GAAGATCGCG CCCTCGCACT CATTGCGACG
GCACAGGCTG CCGCAGTGCA GCCGATGCTG CTGAAATCAG AGTATGCGGA CCTGCCACTT
TTGTCTGCCG TGGCGCCGGC CAAATTTGGC GGGCGCGCCG GGCCGCTCAA TTACACGGAC
GTCCCACCGG GAGAGATCTC GCGCCGTCAT GTCGCAGATA TTTATAGTTA CCCCAACGAG
TTGCGCTGCA TCATCGTCAA CGGCCATCAA GTGCGAGACT GGCTCGAGAT GTCCGCAGGG
CTCTTTAATC AGCTGGAGCC TGATGCAGAC GCGCGCCTGC TGGCAGATCC TGCGCGCCCG
GGGCACAACT TTGATGTCAT TTTCGGCCTG CAGTATGAAA TCGACCCTCG AGAGCACGCG
CGATTTGATG CCGAAGGACG CAGGCTCCAT GAAGGGCCGG GGCGGATCAG GAACCTGCAG
TGGAATGGCC GCCCCATGCA CGGGGACCAG CAGTTTGCAG TTGCCTTCAA CAGCTACCGC
AGCAGCGGCG GTGGCAATTT TCGAATGCTT ATGGATGCGC CCGGTCTGCC CCTGCCGCCG
CAGATGATCC GGGATGTGGT CGGCGCCTAT GTGGCCTCTG CACATGACCT TTCCGCCGTC
TTTCCGGCGC CCTGGCGCTT CAGCCCGGAC TTGGGCGTGG ATGCGATTGC CCTCACGGGC
CCGGGTGCCA GGCGCCACCT CCATGAATTG CCCGAGAATG TGGCCCGCTC CGCAACAGAG
CTCGACACTG GGTTTCTGGC GCTGAAGCTG CGCCTCTGA
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| Protein sequence | MTQDDQDATG TQEEAGDQPG VTGRLRVLAT SDVHSHLLGF DYYADQEHPG IGLSRTAQLI
AEARKEAAEA GDIAVLLDNG DWLQGSPLAE PALATDSALA PAIHAFEVLG YDAVGLGNHE
FNYGLSALSR VLSALPCPAV SSNITPLSAD DTLPVHKHLI LTRHFRRATG GQDGVAEVKI
GLLSVLPPQT MLWDADHLAG RLHVDDMLRS AKAAISDLRA SGADVVIALA HTGEGDDTAR
DGMENALRPL SRLPGLDAAI GGHTHLLLPP PDGSGRDWEI PVVMPGSGGS HLGVIDLGLR
QTPQGWRVEG GSAALRAVAH QTRDGLRPVV SEAPDLVLAL RDVHEQTRAE MAAKVGTLSE
AHHSYFTYFA EDRALALIAT AQAAAVQPML LKSEYADLPL LSAVAPAKFG GRAGPLNYTD
VPPGEISRRH VADIYSYPNE LRCIIVNGHQ VRDWLEMSAG LFNQLEPDAD ARLLADPARP
GHNFDVIFGL QYEIDPREHA RFDAEGRRLH EGPGRIRNLQ WNGRPMHGDQ QFAVAFNSYR
SSGGGNFRML MDAPGLPLPP QMIRDVVGAY VASAHDLSAV FPAPWRFSPD LGVDAIALTG
PGARRHLHEL PENVARSATE LDTGFLALKL RL
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