Gene TM1040_0143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_0143 
Symbol 
ID4078810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp156335 
End bp156646 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content59% 
IMG OID638005437 
ProductETC complex I subunit region 
Protein accessionYP_612138 
Protein GI99079984 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000705205 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCGC GGATTTACCG GCCAGCTCGA AACGCCATGA CCTCTGGTAT GGCCAAGACG 
CGGAAATGGG TGCTGGAATA CGCCCCTGCG GATGCGCGCG AGGTGGATCC GCTGATGGGC
TGGACGTCGT CCTCCGACAC CCAGAGCCAG GTGCGTCTCA AATTCGATAC CAAGGAAGAG
GCACTGGAAT ACGCCGATGA CCACGGCATC GAAGTTGAAG TACACGAGCC CAAGACCCGC
AAGCCTAATC TGCGGGCAGG TGGTTACGGA GAAAACTTCG CCACCAATAG ACGCGGCCCT
TGGACGCACT AA
 
Protein sequence
MRARIYRPAR NAMTSGMAKT RKWVLEYAPA DAREVDPLMG WTSSSDTQSQ VRLKFDTKEE 
ALEYADDHGI EVEVHEPKTR KPNLRAGGYG ENFATNRRGP WTH