Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_0137 |
Symbol | |
ID | 4078742 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | - |
Start bp | 151103 |
End bp | 152278 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 638005431 |
Product | histidine kinase |
Protein accession | YP_612132 |
Protein GI | 99079978 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4251] Bacteriophytochrome (light-regulated signal transduction histidine kinase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00141334 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.983928 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAATGT CGATGCTCGA GAGTGAGGTC ACAGAGGCCT GGGCCGAACA ATACGAAACC GCTTTTGTGA CATATTGCAA CACCGGCTCC GAGGAGGCTT TGATCGAAGC ATATGCCTTT GCCCGGGAAG GTCTTGCTGC CAGCATGACC CTCGCAGTTT TTGCGTGTCT CCATCATGCA GCATTTTTCA AGCTTCTCGA GCAATCCGGT CCGGGGAACA ATCTTTATGA ACGCGCATTG GACTTTTATC TCGAAGGGGT CTCAGTGTTC GATATGGCCA TCCATGGGTA CCAAAACAAT GTTGCGCGCC TCAAAGAAGA AGTCACAGAG CGACGGCGCA TAGAGGAAGA TCTGCGCGCC GCCACCTTTG AGCTGTCTCG ACAACGCAGC GACCTCGACA TTCAAGTTCG CCAACGCACC GCAGAGTTGC GAGAGAGGGC GGAGGAGCTG GAGCAGTCCA ATCGCTTGCT CCTCCAGACC AACAAGGAGA CATCAGAGTT TTCCTACGCG CTGTCTCATG ACCTCAAATC TCCGATCAAC ACGATAGGCA TGCTTCTTGA TGCTATCCGA GAGGAACTGC CACCAGACAG CGAATCCGAA TGCGCAGACC TCGTATCGGA TGCATCGCTG ACAGCAGAGC GCATGAAGCG TCTGATCGAT GATGTATTGC AATACTCGCA AGTCGTTGGA AACACGCTTG AACGGGAATT GGTCGACATG AGCCAACTGT GCCAAGACGC CCTGTCTGAC ATGCGCCACG CGATCGACGA AGCACAAGCC GATATCTCAT GCTCCCATCT CCCGGTCGTG CGCGGAAGCG CGTTTCAACT GGCTATCATG CTGCGAAATT TCCTATCAAA CGCACTGACC TACCGCGATG CCTCTCGCCC CTTAAGGGTC GAGATCTCAG CGGGACCCAC CGCAGAGACT GGCCGGGTTT TGATTTCGAT TGCCGACAAC GGCATCGGCA TGCCACCAGA CTGCCATGCC CGGATTTTTA ACCTGTTCAC AAGGCTTCAC ACTTACAGCG ATTTTGAAGG ATCCGGCATT GGGTTAGCAT TATGTAAACG CGTGGCAAAT AATCATAACA GTGACATCGA AGTCGAATCC GTCGAGGGGC AAGGGACTAT ATTCAGCTTC TCTATCGAAA GCGAGGAGGT TGATACATGG CATTAA
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Protein sequence | MTMSMLESEV TEAWAEQYET AFVTYCNTGS EEALIEAYAF AREGLAASMT LAVFACLHHA AFFKLLEQSG PGNNLYERAL DFYLEGVSVF DMAIHGYQNN VARLKEEVTE RRRIEEDLRA ATFELSRQRS DLDIQVRQRT AELRERAEEL EQSNRLLLQT NKETSEFSYA LSHDLKSPIN TIGMLLDAIR EELPPDSESE CADLVSDASL TAERMKRLID DVLQYSQVVG NTLERELVDM SQLCQDALSD MRHAIDEAQA DISCSHLPVV RGSAFQLAIM LRNFLSNALT YRDASRPLRV EISAGPTAET GRVLISIADN GIGMPPDCHA RIFNLFTRLH TYSDFEGSGI GLALCKRVAN NHNSDIEVES VEGQGTIFSF SIESEEVDTW H
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